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The map label for this gene is ybgI [C]

Identifier: 148380886

GI number: 148380886

Start: 3123725

End: 3124528

Strand: Reverse

Name: ybgI [C]

Synonym: CBO2935

Alternate gene names: 148380886

Gene position: 3124528-3123725 (Counterclockwise)

Preceding gene: 148380887

Following gene: 148380885

Centisome position: 80.39

GC content: 27.11

Gene sequence:

>804_bases
ATGTATTTAAATGTTAAAAACATAGAAAATATAATAGAAGAATATGCTCCTTTATATTTAAAGGAAAATTACGATAATGT
GGGCCTTATGGTAGGGGATTCAAAAGCCACTGTAAATAAAATATTAGTTGCTTTAGATTGTACCTTAGATGTAATAGAAG
AGGCGAAAAAAAAGGAGTGTAATTTTATAGTTACTCATCATCCTTTATTATTTAAAAAACCTTCTTCTATAACTACAGAT
ACTTTATTGGGTAAAAAAATAATAGAATTGATAAAAAATGATATAAATTTATATTCTAGTCATACAAATTTAGACTCTAC
AGAAAATGGCTTTAATCAAATAGTAGCAGAACTTTTGAAGTTACAAGATTTAAAAATATTAGATCCTAACGCTTATAATA
ATAATACGGGTATAGGTAGAATAGGTTATTTAAAAGAAGAAGTTACTTTAGATAAATTATGTGAAATTGTAAAGGAAGTT
TTCAATATTCCTGCATTAAGATACTCAGGAGAAGACTCTTTAAAAATAAAAAAAGTAGCTATAATAAATGGCAGTGGCCA
AGATTATTTTGATAAAGCGAAAGCTTTAGGTGCAGATTGTGTAATAACAGGGGATACAACATACCATTATGTAAGTGATT
TAATGGAAGAAAAAATAGGAGTTATTGATGCAGGGCACTTTCATACAGAATGGCCAGCTTTACAATGCTTTTATAAATGG
CTAAAAAATAGAATAGAAGAAATGGGTTTTAAAAATGATGTTTTTTTATCTGAGAACAATTTTTCACCCTACAAGTATAA
ATAG

Upstream 100 bases:

>100_bases
ATAAAAAAATACTACAATATATAAGAGAAGACACAGAAAGTGCAGCCTTAAGAAAAGCAGAAATAAAAGAAAAAATATTT
AAATTGGAGGAGCTGGTACA

Downstream 100 bases:

>100_bases
AAATGAGTTTAATGTACTCGTTTCTATTTTTTTATATATTCATAACATATCTATAACATAGATTTAAAATTTAACAGATA
TAATATAAAGAGGTATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNFIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDPNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFDKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK

Sequences:

>Translated_267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNFIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDPNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFDKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK
>Mature_267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNFIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDPNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFDKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272362, Length=174, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI209862879, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI215272360, Length=173, Percent_Identity=27.7456647398844, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI56605983, Length=173, Percent_Identity=27.7456647398844, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321217, Length=258, Percent_Identity=29.0697674418605, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19921430, Length=257, Percent_Identity=29.5719844357977, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 30377; Mature: 30377

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKEC
CCCCHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NFIVTHHPLLFKKPSSITTDTLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLK
CEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LQDLKILDPNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEECCCCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFDKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
EEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
LKNRIEEMGFKNDVFLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKEC
CCCCHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NFIVTHHPLLFKKPSSITTDTLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLK
CEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LQDLKILDPNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEECCCCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFDKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
EEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
LKNRIEEMGFKNDVFLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]