| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is napA [H]
Identifier: 148380811
GI number: 148380811
Start: 3031592
End: 3032809
Strand: Reverse
Name: napA [H]
Synonym: CBO2853
Alternate gene names: 148380811
Gene position: 3032809-3031592 (Counterclockwise)
Preceding gene: 148380812
Following gene: 148380810
Centisome position: 78.03
GC content: 31.28
Gene sequence:
>1218_bases TTGTTATCTTATGAATTCTTATTAGATCTTGCGATTATATTGTTAAGTACAAAAGTCTTAGGTATGGTTACTAAAAAATT ACACATGCCTAAGGTTGTAGGTGCATTATTAGCGGGTCTTATACTAGGACCATGTGTACTGAATATAGTACATGAAACTG ACTTTCTAGCGAAAATGGCCCAACTAGGAGTAATTATTTTAATGTTTTCAGCAGGCTTACAAACAGATCTTAAGGAATTA AAAAAATGTGGTAGGGCTTCCTTGATTATTGCTATATTAGGAACAGTTGTCCCTTTATTAGGAGGATACTTTGTATCAGC ACTATTCTTTGATTCTAATGGGATCTTTGATATAACTTCAAAAGCATTTATTAAGAATTTTTTTATTGGGGTAATATTAA CTGCTACTTCTGTTAGTATTACTGTTGAAACTTTACAAGAACTAGGCAGATTGAAAACACGTTCTGGAACAGCTATATTA GGGGCAGCAATTATTGATGATATTTTAGGAATAATCATTTTAACTATGGTTACAAGTTCTACAAATAATTCAACAAGTAT TAATTTAGTGCTTCTAAAAATTGTAGCATTCTTTATATTATCTACTATCTGTGGAGTAGTGTTGCATCACATTTTCAATA GAATTTATAAACGTTATGGTAATATAAGTGGAATTTCAGCTGTTACATTTTCTTTTTGTCTAATTATGGCCTTTATTGCA GAGCACTTTTTTGGTGTAGCAGATATAACAGGTGCTTTTATAGCTGGAGTTATTATTTCAAATACGTCTTTTCGTGAGCA TGTAGAAAAAAATTTCGAAGTAATTTCCTATATGCTTTTATCTCCCGTATTTTTTGCCAGTATAGGTTTAAATACAACAA TGAAACATATGAATAATAAAATGAGGCTGTTTACAATTGCATTATTACTAATGGCGATATTAGCAAAAGTCATAGGGTGT TTTATAGGAGGAAGAATTTGCAAATACACATATGCTGAATCTCTTAGAATCGGAATTGGAATGATATCACGTGGAGAAGT TGCCCTAATAATTGCAAAGAAAGGTGCCGCATTAGGTTTGATAGAAGCACAATTCTTCGGATCGATAGTTTTTGTAGTTA TAGCAACTACCCTTATAACACCTATATTATTAAAGATGGTGTATAGTACTAAATTCAATGATATTAAAGCATATGATTCC TTGCATAGTGCTGCTTAA
Upstream 100 bases:
>100_bases TTTTGAAAAAAGGTATCTATAAAATTTAATTAAACTTAGTGTTACAATTTTGCTTAACTAAGTCAAAACCTATAATAATA CTTTAAAGGAGGAGTTAAAT
Downstream 100 bases:
>100_bases TATTCATGAATAAGATAAATTTTATCCTAGAAACTTTATAAATACTTTCAAAGGCAGAACTTAATTTATATATATATCTT AACCTTTCAATGATTCAACT
Product: transporter, monovalent cation:proton antiporter-2 (CPA2) family
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLSYEFLLDLAIILLSTKVLGMVTKKLHMPKVVGALLAGLILGPCVLNIVHETDFLAKMAQLGVIILMFSAGLQTDLKEL KKCGRASLIIAILGTVVPLLGGYFVSALFFDSNGIFDITSKAFIKNFFIGVILTATSVSITVETLQELGRLKTRSGTAIL GAAIIDDILGIIILTMVTSSTNNSTSINLVLLKIVAFFILSTICGVVLHHIFNRIYKRYGNISGISAVTFSFCLIMAFIA EHFFGVADITGAFIAGVIISNTSFREHVEKNFEVISYMLLSPVFFASIGLNTTMKHMNNKMRLFTIALLLMAILAKVIGC FIGGRICKYTYAESLRIGIGMISRGEVALIIAKKGAALGLIEAQFFGSIVFVVIATTLITPILLKMVYSTKFNDIKAYDS LHSAA
Sequences:
>Translated_405_residues MLSYEFLLDLAIILLSTKVLGMVTKKLHMPKVVGALLAGLILGPCVLNIVHETDFLAKMAQLGVIILMFSAGLQTDLKEL KKCGRASLIIAILGTVVPLLGGYFVSALFFDSNGIFDITSKAFIKNFFIGVILTATSVSITVETLQELGRLKTRSGTAIL GAAIIDDILGIIILTMVTSSTNNSTSINLVLLKIVAFFILSTICGVVLHHIFNRIYKRYGNISGISAVTFSFCLIMAFIA EHFFGVADITGAFIAGVIISNTSFREHVEKNFEVISYMLLSPVFFASIGLNTTMKHMNNKMRLFTIALLLMAILAKVIGC FIGGRICKYTYAESLRIGIGMISRGEVALIIAKKGAALGLIEAQFFGSIVFVVIATTLITPILLKMVYSTKFNDIKAYDS LHSAA >Mature_405_residues MLSYEFLLDLAIILLSTKVLGMVTKKLHMPKVVGALLAGLILGPCVLNIVHETDFLAKMAQLGVIILMFSAGLQTDLKEL KKCGRASLIIAILGTVVPLLGGYFVSALFFDSNGIFDITSKAFIKNFFIGVILTATSVSITVETLQELGRLKTRSGTAIL GAAIIDDILGIIILTMVTSSTNNSTSINLVLLKIVAFFILSTICGVVLHHIFNRIYKRYGNISGISAVTFSFCLIMAFIA EHFFGVADITGAFIAGVIISNTSFREHVEKNFEVISYMLLSPVFFASIGLNTTMKHMNNKMRLFTIALLLMAILAKVIGC FIGGRICKYTYAESLRIGIGMISRGEVALIIAKKGAALGLIEAQFFGSIVFVVIATTLITPILLKMVYSTKFNDIKAYDS LHSAA
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=379, Percent_Identity=23.7467018469657, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786685, Length=388, Percent_Identity=23.9690721649485, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1789749, Length=410, Percent_Identity=21.9512195121951, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322367, Length=413, Percent_Identity=26.3922518159806, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 43866; Mature: 43866
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYEFLLDLAIILLSTKVLGMVTKKLHMPKVVGALLAGLILGPCVLNIVHETDFLAKMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGVIILMFSAGLQTDLKELKKCGRASLIIAILGTVVPLLGGYFVSALFFDSNGIFDITS HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH KAFIKNFFIGVILTATSVSITVETLQELGRLKTRSGTAILGAAIIDDILGIIILTMVTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TNNSTSINLVLLKIVAFFILSTICGVVLHHIFNRIYKRYGNISGISAVTFSFCLIMAFIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EHFFGVADITGAFIAGVIISNTSFREHVEKNFEVISYMLLSPVFFASIGLNTTMKHMNNK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCH MRLFTIALLLMAILAKVIGCFIGGRICKYTYAESLRIGIGMISRGEVALIIAKKGAALGL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEECCCCEEEEEEECCCEEHH IEAQFFGSIVFVVIATTLITPILLKMVYSTKFNDIKAYDSLHSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MLSYEFLLDLAIILLSTKVLGMVTKKLHMPKVVGALLAGLILGPCVLNIVHETDFLAKMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGVIILMFSAGLQTDLKELKKCGRASLIIAILGTVVPLLGGYFVSALFFDSNGIFDITS HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH KAFIKNFFIGVILTATSVSITVETLQELGRLKTRSGTAILGAAIIDDILGIIILTMVTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TNNSTSINLVLLKIVAFFILSTICGVVLHHIFNRIYKRYGNISGISAVTFSFCLIMAFIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EHFFGVADITGAFIAGVIISNTSFREHVEKNFEVISYMLLSPVFFASIGLNTTMKHMNNK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCH MRLFTIALLLMAILAKVIGCFIGGRICKYTYAESLRIGIGMISRGEVALIIAKKGAALGL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEECCCCEEEEEEECCCEEHH IEAQFFGSIVFVVIATTLITPILLKMVYSTKFNDIKAYDSLHSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]