| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is gptB [H]
Identifier: 148380802
GI number: 148380802
Start: 3022098
End: 3023009
Strand: Direct
Name: gptB [H]
Synonym: CBO2845
Alternate gene names: 148380802
Gene position: 3022098-3023009 (Clockwise)
Preceding gene: 148380798
Following gene: 148380803
Centisome position: 77.75
GC content: 35.09
Gene sequence:
>912_bases ATGGCAAAAGAATTAAAATTAACCAAAAAAGATCATATTTCTGTTTGGTTGCGTTCATTTTTCCTTCAAGGTTCTTGGAA CTATGAAAGAATGCAAAACGGTGGTTGGGCATTCGCAATGATTCCTGCAATCAAAAAATTATACAAGACTAAAGAAGATC GAGCAGATGCATTGAAACGTCACTTGGAGTTCTTTAACACTCACCCATATGTAGCTTCACCAGTTCTTGGGGTAACATTA GCTTTAGAAGAACAACGTGCAAATGGTGCAGAAATCGATGATATAACTATTCAAGGTGTTAAAGTTGGTATGATGGGACC TTTAGCTGGTATTGGAGATCCAGTTTTTTGGTTTACTGTTAGGTCAATTTTAGGGGCATTAGCTTCTTCACTTGCTATGA ATGGTAATATCCTAGGACCATTAATCTTTTTCTTGGCTTGGAATATCATCCGTATGGGATTAATGTGGTATACACAAGAG TTCGGTTTCAAAACAGAATCTTGTATTGCTGATGATTTATCAGGTGGTTTACTACAAGATATTACAAAAGGAGCATCCAT CCTTGGTATGTTCATTTTAGGAGCATTAGTTAACAGATGGGTATCCGTTAAATTTACACCAGTAGTATCATCCGTTAAGT TAAGTGATGGTGCTTTCATTGATTGGAGCAAACTTCCTAAAGGAGTGAAAGGTATTCAACAAGTTCTTTTACAACAAGGA TCTGGTATGTCATTAACTGATTATAAAGTTACAACATTCCAAGATAGCTTGGATTCATTAATTCCTGGACTTGCAGAATT AATAATTACATTTATTTGTATGTGGTTACTTAAGAAGAAAGTATCTCCAATTACCATTATCCTTGGGATATTTGCAATGG GTATTGTTTTCCACTTAATCGGTTTAATGTAA
Upstream 100 bases:
>100_bases AAAGTATTTTCTGCTGTTACTTGTGGTGTTGTTTTCTTGTAATTCTTTTTCTTCTTACGACAAACAGATTTTAAATTCAG AATTGACAAAGGACATGAAA
Downstream 100 bases:
>100_bases CATTTTTTATTTAGCCTAGGCTTTTAGCCTGGGCTTTTGTTAGCATATAAAGCAGTTAAAGAATGAAACAAATTGATGAA ATATGTGTTATTTTTAATGG
Product: PTS system, mannose-specific IID component
Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EII-M-Man; EIID-Man; PTS system mannose-specific EIID component [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAKELKLTKKDHISVWLRSFFLQGSWNYERMQNGGWAFAMIPAIKKLYKTKEDRADALKRHLEFFNTHPYVASPVLGVTL ALEEQRANGAEIDDITIQGVKVGMMGPLAGIGDPVFWFTVRSILGALASSLAMNGNILGPLIFFLAWNIIRMGLMWYTQE FGFKTESCIADDLSGGLLQDITKGASILGMFILGALVNRWVSVKFTPVVSSVKLSDGAFIDWSKLPKGVKGIQQVLLQQG SGMSLTDYKVTTFQDSLDSLIPGLAELIITFICMWLLKKKVSPITIILGIFAMGIVFHLIGLM
Sequences:
>Translated_303_residues MAKELKLTKKDHISVWLRSFFLQGSWNYERMQNGGWAFAMIPAIKKLYKTKEDRADALKRHLEFFNTHPYVASPVLGVTL ALEEQRANGAEIDDITIQGVKVGMMGPLAGIGDPVFWFTVRSILGALASSLAMNGNILGPLIFFLAWNIIRMGLMWYTQE FGFKTESCIADDLSGGLLQDITKGASILGMFILGALVNRWVSVKFTPVVSSVKLSDGAFIDWSKLPKGVKGIQQVLLQQG SGMSLTDYKVTTFQDSLDSLIPGLAELIITFICMWLLKKKVSPITIILGIFAMGIVFHLIGLM >Mature_302_residues AKELKLTKKDHISVWLRSFFLQGSWNYERMQNGGWAFAMIPAIKKLYKTKEDRADALKRHLEFFNTHPYVASPVLGVTLA LEEQRANGAEIDDITIQGVKVGMMGPLAGIGDPVFWFTVRSILGALASSLAMNGNILGPLIFFLAWNIIRMGLMWYTQEF GFKTESCIADDLSGGLLQDITKGASILGMFILGALVNRWVSVKFTPVVSSVKLSDGAFIDWSKLPKGVKGIQQVLLQQGS GMSLTDYKVTTFQDSLDSLIPGLAELIITFICMWLLKKKVSPITIILGIFAMGIVFHLIGLM
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3716
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIID domain [H]
Homologues:
Organism=Escherichia coli, GI1788122, Length=301, Percent_Identity=49.5016611295681, Blast_Score=300, Evalue=8e-83, Organism=Escherichia coli, GI1789529, Length=303, Percent_Identity=32.3432343234323, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004704 - InterPro: IPR018405 [H]
Pfam domain/function: PF03613 EIID-AGA [H]
EC number: NA
Molecular weight: Translated: 33514; Mature: 33383
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS51108 PTS_EIID
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKELKLTKKDHISVWLRSFFLQGSWNYERMQNGGWAFAMIPAIKKLYKTKEDRADALKR CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHH HLEFFNTHPYVASPVLGVTLALEEQRANGAEIDDITIQGVKVGMMGPLAGIGDPVFWFTV HHHHHCCCCCHHCHHHHHHEEEEHHCCCCCCCCCEEECCEEECCCCCCCCCCCHHHHHHH RSILGALASSLAMNGNILGPLIFFLAWNIIRMGLMWYTQEFGFKTESCIADDLSGGLLQD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH ITKGASILGMFILGALVNRWVSVKFTPVVSSVKLSDGAFIDWSKLPKGVKGIQQVLLQQG HHHHHHHHHHHHHHHHHHHHEEEEEEHHHHEEEECCCCEEEHHHCCHHHHHHHHHHHHCC SGMSLTDYKVTTFQDSLDSLIPGLAELIITFICMWLLKKKVSPITIILGIFAMGIVFHLI CCCCEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GLM HCC >Mature Secondary Structure AKELKLTKKDHISVWLRSFFLQGSWNYERMQNGGWAFAMIPAIKKLYKTKEDRADALKR CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHH HLEFFNTHPYVASPVLGVTLALEEQRANGAEIDDITIQGVKVGMMGPLAGIGDPVFWFTV HHHHHCCCCCHHCHHHHHHEEEEHHCCCCCCCCCEEECCEEECCCCCCCCCCCHHHHHHH RSILGALASSLAMNGNILGPLIFFLAWNIIRMGLMWYTQEFGFKTESCIADDLSGGLLQD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH ITKGASILGMFILGALVNRWVSVKFTPVVSSVKLSDGAFIDWSKLPKGVKGIQQVLLQQG HHHHHHHHHHHHHHHHHHHHEEEEEEHHHHEEEECCCCEEEHHHCCHHHHHHHHHHHHCC SGMSLTDYKVTTFQDSLDSLIPGLAELIITFICMWLLKKKVSPITIILGIFAMGIVFHLI CCCCEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GLM HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]