| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380742
Identifier: 148380742
GI number: 148380742
Start: 2945719
End: 2946756
Strand: Direct
Name: 148380742
Synonym: CBO2782
Alternate gene names: NA
Gene position: 2945719-2946756 (Clockwise)
Preceding gene: 148380735
Following gene: 148380743
Centisome position: 75.79
GC content: 31.21
Gene sequence:
>1038_bases ATGCTAAAATTAGCAAAACCAAAAAGATTAAAACCTGGCGATAAAATAGCTGCAGTAAGTCTTTCATGGGGCGGTGCTGG TGATGCAGACTTACTTTGGAGATATAAATTAGGAAAAAAGAGATTACAAGAACAATTTGGTCTAGAAGTTGTAGAAATGC CAAATACTTTAAAAGGATCAGATTATTTATATCATCATCCAGAAAAACGTGCAGAAGACTTAATGTCAGCTTTTTCTGAT ACATCTATAAAAGGAATTTTTTCTTGTATCGGCGGTGAGGAAAGTATAAGAATGTTACCCTATATTGACTTCAACGTTAT AAAAAATAATCCTAAAATATTTATAGGATATTCTGATACCACTGTATCACATTTTATATGTCTTAAAGGAAATCTCTCTA GTTTCTATGGCGCATCCATTCTTGCGGAACTGGCTGAAAACATTAAAATATTTGATTATACTACCCATTGGCTAAAAAAA GTTCTTTTTGAAACTTCTCCAATTGGATTAATACCAGCAGCCAATGAATGGACTGGAGAGAGAATAGAATGGATTGAAAG TAACTCATTTATTGCAAAGAACATGGTAAAAAATCAAGGATATGAATTTTTGCAAGGCAATGGAATAATTCAAGGACAAT TAATAGGTGGTTGCATGGAAGTACTAGAAATGATAAAAGGTACTACATTATGGCCATCAAATGATGTATTTAAGGACACT ATTTTATTCTTTGAAACCTCAGAAAATATGCCACCCCCTACTTATGTAGAATACTGGCTTAGAAATTATAGTAGTCAAGG TATATTACAAAACTCAAAGGCAATAATTTTTGGTAAACCATACCAAGAAAAATATTATAAAGAATATAAGAACGTAATTA TGAAAATAATATCTGAATTAGAACTTTACCATATACCTATCATATATAATATGTCCTTTGGGCATAATGAACCAATGATG TGTATCCCATATGGTGCAATGGCACAAATTGATTGTAATAAAAGAATATTTTCTATACTTGAATCAGGGGTAGTTTAA
Upstream 100 bases:
>100_bases AAAGAGCAAGTATGTCTCTATAGTCATTCACTAAGCTTTAATAAGAATAAAAACTTTATCTAAGTCCAAAAAATTAATTT ATATTTGTGAGGTGGAATAA
Downstream 100 bases:
>100_bases TTTACTTATTTATAATAATCATTTTTCATTTTAATCATTTAAAAATTATTATAACAACTTTTAAAGAATTTAGAATTCAG AGTAAAAAGTACTGAGTAAT
Product: LD-carboxypeptidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLKLAKPKRLKPGDKIAAVSLSWGGAGDADLLWRYKLGKKRLQEQFGLEVVEMPNTLKGSDYLYHHPEKRAEDLMSAFSD TSIKGIFSCIGGEESIRMLPYIDFNVIKNNPKIFIGYSDTTVSHFICLKGNLSSFYGASILAELAENIKIFDYTTHWLKK VLFETSPIGLIPAANEWTGERIEWIESNSFIAKNMVKNQGYEFLQGNGIIQGQLIGGCMEVLEMIKGTTLWPSNDVFKDT ILFFETSENMPPPTYVEYWLRNYSSQGILQNSKAIIFGKPYQEKYYKEYKNVIMKIISELELYHIPIIYNMSFGHNEPMM CIPYGAMAQIDCNKRIFSILESGVV
Sequences:
>Translated_345_residues MLKLAKPKRLKPGDKIAAVSLSWGGAGDADLLWRYKLGKKRLQEQFGLEVVEMPNTLKGSDYLYHHPEKRAEDLMSAFSD TSIKGIFSCIGGEESIRMLPYIDFNVIKNNPKIFIGYSDTTVSHFICLKGNLSSFYGASILAELAENIKIFDYTTHWLKK VLFETSPIGLIPAANEWTGERIEWIESNSFIAKNMVKNQGYEFLQGNGIIQGQLIGGCMEVLEMIKGTTLWPSNDVFKDT ILFFETSENMPPPTYVEYWLRNYSSQGILQNSKAIIFGKPYQEKYYKEYKNVIMKIISELELYHIPIIYNMSFGHNEPMM CIPYGAMAQIDCNKRIFSILESGVV >Mature_345_residues MLKLAKPKRLKPGDKIAAVSLSWGGAGDADLLWRYKLGKKRLQEQFGLEVVEMPNTLKGSDYLYHHPEKRAEDLMSAFSD TSIKGIFSCIGGEESIRMLPYIDFNVIKNNPKIFIGYSDTTVSHFICLKGNLSSFYGASILAELAENIKIFDYTTHWLKK VLFETSPIGLIPAANEWTGERIEWIESNSFIAKNMVKNQGYEFLQGNGIIQGQLIGGCMEVLEMIKGTTLWPSNDVFKDT ILFFETSENMPPPTYVEYWLRNYSSQGILQNSKAIIFGKPYQEKYYKEYKNVIMKIISELELYHIPIIYNMSFGHNEPMM CIPYGAMAQIDCNKRIFSILESGVV
Specific function: Unknown
COG id: COG1619
COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S66 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003507 [H]
Pfam domain/function: PF02016 Peptidase_S66 [H]
EC number: NA
Molecular weight: Translated: 39311; Mature: 39311
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLAKPKRLKPGDKIAAVSLSWGGAGDADLLWRYKLGKKRLQEQFGLEVVEMPNTLKGS CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEHHHHHHHHHHHHHCCEEEECCCCCCCC DYLYHHPEKRAEDLMSAFSDTSIKGIFSCIGGEESIRMLPYIDFNVIKNNPKIFIGYSDT CCEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEECCC TVSHFICLKGNLSSFYGASILAELAENIKIFDYTTHWLKKVLFETSPIGLIPAANEWTGE CEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCC RIEWIESNSFIAKNMVKNQGYEFLQGNGIIQGQLIGGCMEVLEMIKGTTLWPSNDVFKDT CEEEECCCCHHHHHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEE ILFFETSENMPPPTYVEYWLRNYSSQGILQNSKAIIFGKPYQEKYYKEYKNVIMKIISEL EEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHH ELYHIPIIYNMSFGHNEPMMCIPYGAMAQIDCNKRIFSILESGVV HEEEEEEEEEECCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MLKLAKPKRLKPGDKIAAVSLSWGGAGDADLLWRYKLGKKRLQEQFGLEVVEMPNTLKGS CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEHHHHHHHHHHHHHCCEEEECCCCCCCC DYLYHHPEKRAEDLMSAFSDTSIKGIFSCIGGEESIRMLPYIDFNVIKNNPKIFIGYSDT CCEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEECCC TVSHFICLKGNLSSFYGASILAELAENIKIFDYTTHWLKKVLFETSPIGLIPAANEWTGE CEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCC RIEWIESNSFIAKNMVKNQGYEFLQGNGIIQGQLIGGCMEVLEMIKGTTLWPSNDVFKDT CEEEECCCCHHHHHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEE ILFFETSENMPPPTYVEYWLRNYSSQGILQNSKAIIFGKPYQEKYYKEYKNVIMKIISEL EEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHH ELYHIPIIYNMSFGHNEPMMCIPYGAMAQIDCNKRIFSILESGVV HEEEEEEEEEECCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]