| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is sseA [C]
Identifier: 148380571
GI number: 148380571
Start: 2763468
End: 2764442
Strand: Direct
Name: sseA [C]
Synonym: CBO2615
Alternate gene names: 148380571
Gene position: 2763468-2764442 (Clockwise)
Preceding gene: 148380559
Following gene: 148380573
Centisome position: 71.1
GC content: 30.77
Gene sequence:
>975_bases ATGAAAATGAAAAAAAATTTCTTTAAAAGTTTTTCCTCTATTATTCTTTGTTTTGTTTTAGGGGTTATAATTTTTACTGG TTGTTCTAATTCATCTTCTAATAAAGAAGAAACAAAGGATAAAAAGCAAGAAACAACACAAAAAGAATCCTATAAAGACA GTAGTTACATAATAAGTTCTGACTGGCTATCTAAAAATTTAAATAAAGATAATGTAATAATAGTAGATGCTCGCCCTGAC AAAGACTATAAAAAAGGTCATATACCTGGAGCTATAAATGTTCAGTGGCCATATTTTACTAACCAGGAAGGGAAACCTGG TGAAAAGGATTGGGGAATGCTTTTACCAGAAAAAGAACTTTCTAAAAAATTGTCCTCCCTAGGTATAGATAAAAATAAAA CCATCGTTGCTTATGCAGAAAATAAAAGTGGTTGGGGAGAAGATGGAAGAATAATTTGGATGCTTAGAATGGTAGGCATA GAAAATTCCAAAATGTTAAATGGTGGATTTGACTATTGGAAAAACAAAAGCTTAGAAATATCAAAAGATGATGTTACTCC TAAAAAAAGTGATTTTGTAGTAGAGAACATGGACAAATCTATGTATGCAGATACAAAGTGGGTTAAAGAAAACTTAGACA AAATAAAAATATTAGATGCTAGAGAAGAAGTAGAATATAAGGGTGCAACAAAATATGGTGAGGCTAGAGGTGGACACCTA CCTGGAGCTAAGCTATTTACTTTTAATAAAGCATTCAATGATGATCAAAGTTTAAAAAGCCAAAAAGAAATAGAAGGCCT GTTAACAGAAGCTGGTATTAAAAAAGATGATGAAATACTTACTTACTGTACTGCTGGTATAAGATCTGCCCACTTAGCTT TAGTATTAAAAATGTGCGGATATAATAATGTTAAAAACTATGATGGTTCCTTCTATATGTGGTCAGCAGATAAGAATTTA CAGATAGAAAAATAA
Upstream 100 bases:
>100_bases GGTTATAGTCCACCTATTTGTATTTTTTATTAACTTTTATATGTAAAAAATTAAATGATATACTAATTATGACATCTATT AAAAAGGAGTGGAATAATAT
Downstream 100 bases:
>100_bases TTTGAATATATTAATTAAATTATTAAATATCACATGCATTGTATAATTTTAAAATAGAACTATATTGAAATATTAGTTGG TTAAATTTAAAATATTGCAT
Product: putative thiosulfate sulfurtransferase
Products: NA
Alternate protein names: Rhodanese-like protein [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDSSYIISSDWLSKNLNKDNVIIVDARPD KDYKKGHIPGAINVQWPYFTNQEGKPGEKDWGMLLPEKELSKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGI ENSKMLNGGFDYWKNKSLEISKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKIKILDAREEVEYKGATKYGEARGGHL PGAKLFTFNKAFNDDQSLKSQKEIEGLLTEAGIKKDDEILTYCTAGIRSAHLALVLKMCGYNNVKNYDGSFYMWSADKNL QIEK
Sequences:
>Translated_324_residues MKMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDSSYIISSDWLSKNLNKDNVIIVDARPD KDYKKGHIPGAINVQWPYFTNQEGKPGEKDWGMLLPEKELSKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGI ENSKMLNGGFDYWKNKSLEISKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKIKILDAREEVEYKGATKYGEARGGHL PGAKLFTFNKAFNDDQSLKSQKEIEGLLTEAGIKKDDEILTYCTAGIRSAHLALVLKMCGYNNVKNYDGSFYMWSADKNL QIEK >Mature_324_residues MKMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDSSYIISSDWLSKNLNKDNVIIVDARPD KDYKKGHIPGAINVQWPYFTNQEGKPGEKDWGMLLPEKELSKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGI ENSKMLNGGFDYWKNKSLEISKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKIKILDAREEVEYKGATKYGEARGGHL PGAKLFTFNKAFNDDQSLKSQKEIEGLLTEAGIKKDDEILTYCTAGIRSAHLALVLKMCGYNNVKNYDGSFYMWSADKNL QIEK
Specific function: May Be A Sulfotransferase Involved In The Formation Of Thiosulfate. The Rhodanese Activity Of Ssea Is Weak, Its Participation In Detoxification Of Cyanide May Be Small. May Be Involved In The Enhancement Of Serine-Sensitivity. [C]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=276, Percent_Identity=25, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI194473668, Length=308, Percent_Identity=23.0519480519481, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI61835204, Length=265, Percent_Identity=24.9056603773585, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI194473681, Length=265, Percent_Identity=24.9056603773585, Blast_Score=99, Evalue=6e-21, Organism=Escherichia coli, GI87082121, Length=285, Percent_Identity=24.5614035087719, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081967, Length=254, Percent_Identity=24.0157480314961, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997283, Length=291, Percent_Identity=26.4604810996564, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17561888, Length=312, Percent_Identity=24.6794871794872, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17559150, Length=258, Percent_Identity=23.2558139534884, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 36876; Mature: 36876
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDSSYIISS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC DWLSKNLNKDNVIIVDARPDKDYKKGHIPGAINVQWPYFTNQEGKPGEKDWGMLLPEKEL HHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHHH SKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGIENSKMLNGGFDYWKNKSLEI HHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEECCCHHHHCCCCEEE SKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKIKILDAREEVEYKGATKYGEARGGHL ECCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCC PGAKLFTFNKAFNDDQSLKSQKEIEGLLTEAGIKKDDEILTYCTAGIRSAHLALVLKMCG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC YNNVKNYDGSFYMWSADKNLQIEK CCCCCCCCCCEEEEECCCCCEECC >Mature Secondary Structure MKMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDSSYIISS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC DWLSKNLNKDNVIIVDARPDKDYKKGHIPGAINVQWPYFTNQEGKPGEKDWGMLLPEKEL HHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHHH SKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGIENSKMLNGGFDYWKNKSLEI HHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEECCCHHHHCCCCEEE SKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKIKILDAREEVEYKGATKYGEARGGHL ECCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCC PGAKLFTFNKAFNDDQSLKSQKEIEGLLTEAGIKKDDEILTYCTAGIRSAHLALVLKMCG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC YNNVKNYDGSFYMWSADKNLQIEK CCCCCCCCCCEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]