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The map label for this gene is trpH [H]

Identifier: 148380559

GI number: 148380559

Start: 2752237

End: 2753076

Strand: Direct

Name: trpH [H]

Synonym: CBO2604

Alternate gene names: 148380559

Gene position: 2752237-2753076 (Clockwise)

Preceding gene: 148380558

Following gene: 148380571

Centisome position: 70.81

GC content: 29.4

Gene sequence:

>840_bases
ATTTATATAAAAGGTGATTTTCACACCCATACTAGTGCTTCTGATGGCAAATATTCATCAAAGGAATTAATTTATCTAGC
TAAAAAGGAAGGACTAGATATAATATCCATAACAGATCATGATACTACAGATGGAATAGAGGAAGCGTTGTTTTATGGAA
AAAAATTAAACATAAAAGTTATTCCTGGTATAGAATTATCCACTACATATAATAACTGCAGTATTCACGTTTTAGGCTAT
TTTAAAGGAAATAATTATAAAAACAACTTAATACAAAGTTTTCAAAAACACAAAAAAGAATATAGAAAAAGAAGAGCCAA
TGAGATAGTAGATAAACTAAAAAAACATTTTAATATAATAATAAGTTTTGATGAAATAATGGACTCTACAAAAGGAGTTA
TTTCAAGGCCTCATATTGCAAAAGCAATTGTAGAAGCTGGATATGATTATAGTTGGGACTATATATTTTCAAACTTCATT
GGAGAGGGATGCAAGGCCTATGTACCAAATAAGACTATTTCCACTGAAGAAGGTATCTCTCTATTAAAAGAATCCGGTGC
CATATCTGTTTTAGCTCATCCTGTATTAATTAAAAAAACTAATGTAGAGGACTTATTTAAATTAGATTTCCACGGAGTAG
AAGCCATATATTATATGAATAAACCAGAGGATACTACTAGATTCAAAAATCTGGCTAAAAAATATAACAAAATTATAACT
GGTGGTTCAGATTTTCACGGATTAACCAAAACTGATGGAAGCCATCCAGATAGAATAGGGGCAACTACCTTAGATCAAGG
TAATATAGAAAAACTCCTAAAATCTATAAACTCAATATAA

Upstream 100 bases:

>100_bases
TTTATAAATAAGTTAATTCATTATATTTGTATATTTTATTTATTATAGTTTACTATACAATATATAGTAAACTCATTAAT
TTTTAAAGGAGGTAATTCTT

Downstream 100 bases:

>100_bases
GGAAATTACGACTTAAAAGGGTGTATATTACCCATGATTTTAAAAAGGGATATATGGTTAAAGAGATAGTTCGCTTCAAT
AAGAGATTCTAATTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MYIKGDFHTHTSASDGKYSSKELIYLAKKEGLDIISITDHDTTDGIEEALFYGKKLNIKVIPGIELSTTYNNCSIHVLGY
FKGNNYKNNLIQSFQKHKKEYRKRRANEIVDKLKKHFNIIISFDEIMDSTKGVISRPHIAKAIVEAGYDYSWDYIFSNFI
GEGCKAYVPNKTISTEEGISLLKESGAISVLAHPVLIKKTNVEDLFKLDFHGVEAIYYMNKPEDTTRFKNLAKKYNKIIT
GGSDFHGLTKTDGSHPDRIGATTLDQGNIEKLLKSINSI

Sequences:

>Translated_279_residues
MYIKGDFHTHTSASDGKYSSKELIYLAKKEGLDIISITDHDTTDGIEEALFYGKKLNIKVIPGIELSTTYNNCSIHVLGY
FKGNNYKNNLIQSFQKHKKEYRKRRANEIVDKLKKHFNIIISFDEIMDSTKGVISRPHIAKAIVEAGYDYSWDYIFSNFI
GEGCKAYVPNKTISTEEGISLLKESGAISVLAHPVLIKKTNVEDLFKLDFHGVEAIYYMNKPEDTTRFKNLAKKYNKIIT
GGSDFHGLTKTDGSHPDRIGATTLDQGNIEKLLKSINSI
>Mature_279_residues
MYIKGDFHTHTSASDGKYSSKELIYLAKKEGLDIISITDHDTTDGIEEALFYGKKLNIKVIPGIELSTTYNNCSIHVLGY
FKGNNYKNNLIQSFQKHKKEYRKRRANEIVDKLKKHFNIIISFDEIMDSTKGVISRPHIAKAIVEAGYDYSWDYIFSNFI
GEGCKAYVPNKTISTEEGISLLKESGAISVLAHPVLIKKTNVEDLFKLDFHGVEAIYYMNKPEDTTRFKNLAKKYNKIIT
GGSDFHGLTKTDGSHPDRIGATTLDQGNIEKLLKSINSI

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=255, Percent_Identity=31.3725490196078, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31513; Mature: 31513

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKGDFHTHTSASDGKYSSKELIYLAKKEGLDIISITDHDTTDGIEEALFYGKKLNIKV
CEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
IPGIELSTTYNNCSIHVLGYFKGNNYKNNLIQSFQKHKKEYRKRRANEIVDKLKKHFNII
ECCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ISFDEIMDSTKGVISRPHIAKAIVEAGYDYSWDYIFSNFIGEGCKAYVPNKTISTEEGIS
EEHHHHHHHHHCHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHH
LLKESGAISVLAHPVLIKKTNVEDLFKLDFHGVEAIYYMNKPEDTTRFKNLAKKYNKIIT
HHHHCCCEEEEECCEEEEECCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
GGSDFHGLTKTDGSHPDRIGATTLDQGNIEKLLKSINSI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MYIKGDFHTHTSASDGKYSSKELIYLAKKEGLDIISITDHDTTDGIEEALFYGKKLNIKV
CEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
IPGIELSTTYNNCSIHVLGYFKGNNYKNNLIQSFQKHKKEYRKRRANEIVDKLKKHFNII
ECCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ISFDEIMDSTKGVISRPHIAKAIVEAGYDYSWDYIFSNFIGEGCKAYVPNKTISTEEGIS
EEHHHHHHHHHCHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHH
LLKESGAISVLAHPVLIKKTNVEDLFKLDFHGVEAIYYMNKPEDTTRFKNLAKKYNKIIT
HHHHCCCEEEEECCEEEEECCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC
GGSDFHGLTKTDGSHPDRIGATTLDQGNIEKLLKSINSI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]