Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 148380409

GI number: 148380409

Start: 2582142

End: 2583053

Strand: Reverse

Name: ftsY [H]

Synonym: CBO2451

Alternate gene names: 148380409

Gene position: 2583053-2582142 (Counterclockwise)

Preceding gene: 148380410

Following gene: 148380408

Centisome position: 66.46

GC content: 32.13

Gene sequence:

>912_bases
ATGTTTGGAAAATTTTTTGACAAATTAAAAGAAGGATTAACAAAAACTAAGGATGGATTTACAGATAAGATAAGTAGTGT
ATTAAATTTAGCTGTAACTATAGATGAAGATTTATATGAAGAATTAGAAGAAATACTTGTTACTGCTGATATAGGAGTAG
ATACTTCCATAAAAATCATAGATAGATTGAGAGAAAGAGTAAAGGAAGAAAAAATAAAGGATCCAGCAGAAATAAAACCT
TGTCTTAAAAGAGTAATATTAGAAATACTAGGAGAAGAAAAAGGTTCTATAACACCAGACACTACTCCAAAAGTTATGCT
TATAATTGGAGTTAACGGTGTAGGAAAAACTACCTCCATAGGAAAAGTTTCAGCAAAGTTAAAAAATCAAGGCTATAAGG
TTATAATGGCTGCAGCAGATACCTTTAGAGCAGCAGCTATAGATCAATTAGAAGTATGGAGCAGTAGAGCTAAAGTAGAT
ATAATAAAACACCAGGAAGGATCAGATCCAGGGGCAGTAGTTTTTGATGCAGTTCAAGCAGCTAAATCAAGAAAAGCTGA
TGTATTAATATGTGATACTGCAGGAAGATTGCATAACAAAAAGAATTTGATGAATGAGCTTTCAAAGATAAACAAAATTT
TAGAAAGAGAATATGGTGATGCCTCTAAAGAAACCTTATTAGTTTTAGATGCTACCACAGGCCAAAATGCTGTTATACAA
GCTAAAGAATTTATGTCAGCTTGTCCTATAGATGGTATAATACTTACTAAGTTAGATGGTACAGCAAAAGGTGGGGTAGT
AATATCTATAAAAGACCAACTGGATATACCAGTAAAACTTATAGGAGTTGGAGAAGGCATAGAGGATCTACAGGAGTTTA
ATTCGGAAGAATTTGTAGAAGCATTATTTTAA

Upstream 100 bases:

>100_bases
AAGATGGCAGCCGCTCTAATACTCTCATTTTTAAGAAGGCGGGAGCATTAGAGCGGGTAGTCATCGGATAAAATAATAAG
CATATAAAAGGGGAGATACT

Downstream 100 bases:

>100_bases
TAATAAAATATTTAAAAATTAAACCTTTATAATAATATGTTTTAAATATAAAATAAATATTGATTAGCAATTAAAAAATA
TAATATAAAGATAAAAAACA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILEILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF

Sequences:

>Translated_303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILEILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF
>Mature_303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILEILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=292, Percent_Identity=28.4246575342466, Blast_Score=125, Evalue=3e-29,
Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=31.1557788944724, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI23308697, Length=334, Percent_Identity=28.7425149700599, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI295424842, Length=334, Percent_Identity=28.7425149700599, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=30.3703703703704, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1789874, Length=300, Percent_Identity=49, Blast_Score=264, Evalue=7e-72,
Organism=Escherichia coli, GI1788963, Length=299, Percent_Identity=33.1103678929766, Blast_Score=152, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=28.7719298245614, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=28.3783783783784, Blast_Score=102, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=301, Percent_Identity=30.5647840531561, Blast_Score=150, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=231, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17647949, Length=287, Percent_Identity=29.2682926829268, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24641198, Length=225, Percent_Identity=30.6666666666667, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33092; Mature: 33092

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKII
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHH
DRLRERVKEEKIKDPAEIKPCLKRVILEILGEEKGSITPDTTPKVMLIIGVNGVGKTTSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVDIIKHQEGSDPGAVVFDAVQA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
AKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEE
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVE
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCHHHHHH
ALF
HHC
>Mature Secondary Structure
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKII
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHH
DRLRERVKEEKIKDPAEIKPCLKRVILEILGEEKGSITPDTTPKVMLIIGVNGVGKTTSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVDIIKHQEGSDPGAVVFDAVQA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
AKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEE
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVE
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCHHHHHH
ALF
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]