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The map label for this gene is 148380408

Identifier: 148380408

GI number: 148380408

Start: 2581586

End: 2581918

Strand: Reverse

Name: 148380408

Synonym: CBO2450

Alternate gene names: NA

Gene position: 2581918-2581586 (Counterclockwise)

Preceding gene: 148380409

Following gene: 148380407

Centisome position: 66.43

GC content: 24.92

Gene sequence:

>333_bases
ATGGAAGAGATAGTGGAAATGTCCTTACTACTAGATTTTTATGGTAGTTTACTTACAGAAAAGCAAAATAAAATTATGGA
CTTATACTACAACAATGATTATTCATTAAAAGAAATATCAGAACTAACTAACACCAGTAGGCAAGCAGTTCATGACATAG
TAAAAAGATGCCATAAAGCTCTTCTACAGTATGAAGAAAAACTTCATATGATGGAGAGGTTTATAAACTTAGAAAATTCT
AAAGAAAAACTATTAAATATGTTAAATAAAGTGACAAAAGAAAATATAAAAGAAATTGATCATATAAAAAAATATATAAT
TGATAATATTTAG

Upstream 100 bases:

>100_bases
TTGACAGCTTTTTAATATTTTGATATCATATATTTCGTTGATGAAAAATAATAGTTTTTAATAATTAGCAAGGGAGTTAG
ATTAAAATCTGTGATATTTT

Downstream 100 bases:

>100_bases
GAGTGGATTATAATGGCCTTTGATGGATTAGCTTCTAAACTTCAGGATGCTTTAAAGAAGCTTAGAGGTAAAGGTAAGCT
TTCAGAAAAAGATATAAAAG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MEEIVEMSLLLDFYGSLLTEKQNKIMDLYYNNDYSLKEISELTNTSRQAVHDIVKRCHKALLQYEEKLHMMERFINLENS
KEKLLNMLNKVTKENIKEIDHIKKYIIDNI

Sequences:

>Translated_110_residues
MEEIVEMSLLLDFYGSLLTEKQNKIMDLYYNNDYSLKEISELTNTSRQAVHDIVKRCHKALLQYEEKLHMMERFINLENS
KEKLLNMLNKVTKENIKEIDHIKKYIIDNI
>Mature_110_residues
MEEIVEMSLLLDFYGSLLTEKQNKIMDLYYNNDYSLKEISELTNTSRQAVHDIVKRCHKALLQYEEKLHMMERFINLENS
KEKLLNMLNKVTKENIKEIDHIKKYIIDNI

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 13225; Mature: 13225

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIVEMSLLLDFYGSLLTEKQNKIMDLYYNNDYSLKEISELTNTSRQAVHDIVKRCHKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYEEKLHMMERFINLENSKEKLLNMLNKVTKENIKEIDHIKKYIIDNI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEIVEMSLLLDFYGSLLTEKQNKIMDLYYNNDYSLKEISELTNTSRQAVHDIVKRCHKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYEEKLHMMERFINLENSKEKLLNMLNKVTKENIKEIDHIKKYIIDNI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA