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The map label for this gene is nrnA [H]

Identifier: 148380371

GI number: 148380371

Start: 2547147

End: 2548118

Strand: Reverse

Name: nrnA [H]

Synonym: CBO2417

Alternate gene names: 148380371

Gene position: 2548118-2547147 (Counterclockwise)

Preceding gene: 148380372

Following gene: 148380370

Centisome position: 65.56

GC content: 30.14

Gene sequence:

>972_bases
ATGAGTCAAATGATAACTAATGATATACTAGATAAAATAAAGGAAAGTAATAGTGTAGCTATTACTTTCCATACTTCTCC
TGATGGGGATTCCTTAGGAAGCGCTTTAGGATTACTTCAGGGTATAAGAAAACTTAGCAAAAAAGCTTATATAATTTCCA
AAGAACCTATACCAGAAACTTTTAAATATTTGCCCTGTAGTGAAGAAATCACAGGGGAGATAAAAAGGCCTATAGAAGGT
ACAGAGTGTGTTATAGTTTTAGATTGTGGAAATGTAGAAAGAATAAATGCAGAATTAGACTTAGAAAATAGAGAATACTC
CCTAATAAATATAGATCATCACTTATCTAACGATATGTATGGTGATTTAAATTTTGTAGACACAAATGCTCCAGCAGTGG
CTGAGGTTGTATATCAATTGCTAAAAATATTAGAGATAAATTCAGATAAAGATATAGCAGCTTGTTTATACACATCTTTA
ATTACAGATACAGGTTCTTTTAGATATCCAGGTACTACATCTGTAACTCATATGATAGCAGGAGATTTAATAAACACAGG
TCTAGATTTTAGCTCAATACATAGAAAAATATTTGAAAATAAAAAATTTGAAAGATTAAAGCTTTATGGAAAAGTTTTAG
AAGAAATGTATTTAGAAAATGAGAAGTTATGCGTTATGAAAGTAACAGAAAAAATGTTAAAAGAGTTGAACATAGAGGAT
GCAAAGGATACATCAGATATTATATCACAAGGTATGCAAATAGGATCTGTAGAAGTGGCTGTATTATTTAAAGAAGTGGA
AGAGGGAGTAAAGATAAGTTTAAGATCAAAAGAATATGTGGATGTAAGAAAGATAGCTGAAAACTTTGGCGGTGGAGGAC
ATATTCGTGCTTCAGGAGCCTTTATAAAAGGAGAGGCTTTAAATATAGTAGAAAAAAAATTAATAGAAACTATAAAAAAA
GAGTTGATATAA

Upstream 100 bases:

>100_bases
AGAGTTAAATTAAGAAATACACCAGAGGTTATAATAGAAGTAGATAATAGTATTGAAAGAGGTATGCATATAGATGAACT
TCTTCATTCAATAAAGGAGA

Downstream 100 bases:

>100_bases
ATGGATGGAGTAATAAATGTTTTAAAACCAAAGGGGATAACATCCTTTGATGTAGTTAGAGACATAAGAAAAATAGCGAA
AATAAAAAAAGTCGGTCATA

Product: DHH family protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSQMITNDILDKIKESNSVAITFHTSPDGDSLGSALGLLQGIRKLSKKAYIISKEPIPETFKYLPCSEEITGEIKRPIEG
TECVIVLDCGNVERINAELDLENREYSLINIDHHLSNDMYGDLNFVDTNAPAVAEVVYQLLKILEINSDKDIAACLYTSL
ITDTGSFRYPGTTSVTHMIAGDLINTGLDFSSIHRKIFENKKFERLKLYGKVLEEMYLENEKLCVMKVTEKMLKELNIED
AKDTSDIISQGMQIGSVEVAVLFKEVEEGVKISLRSKEYVDVRKIAENFGGGGHIRASGAFIKGEALNIVEKKLIETIKK
ELI

Sequences:

>Translated_323_residues
MSQMITNDILDKIKESNSVAITFHTSPDGDSLGSALGLLQGIRKLSKKAYIISKEPIPETFKYLPCSEEITGEIKRPIEG
TECVIVLDCGNVERINAELDLENREYSLINIDHHLSNDMYGDLNFVDTNAPAVAEVVYQLLKILEINSDKDIAACLYTSL
ITDTGSFRYPGTTSVTHMIAGDLINTGLDFSSIHRKIFENKKFERLKLYGKVLEEMYLENEKLCVMKVTEKMLKELNIED
AKDTSDIISQGMQIGSVEVAVLFKEVEEGVKISLRSKEYVDVRKIAENFGGGGHIRASGAFIKGEALNIVEKKLIETIKK
ELI
>Mature_322_residues
SQMITNDILDKIKESNSVAITFHTSPDGDSLGSALGLLQGIRKLSKKAYIISKEPIPETFKYLPCSEEITGEIKRPIEGT
ECVIVLDCGNVERINAELDLENREYSLINIDHHLSNDMYGDLNFVDTNAPAVAEVVYQLLKILEINSDKDIAACLYTSLI
TDTGSFRYPGTTSVTHMIAGDLINTGLDFSSIHRKIFENKKFERLKLYGKVLEEMYLENEKLCVMKVTEKMLKELNIEDA
KDTSDIISQGMQIGSVEVAVLFKEVEEGVKISLRSKEYVDVRKIAENFGGGGHIRASGAFIKGEALNIVEKKLIETIKKE
LI

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 36061; Mature: 35930

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMITNDILDKIKESNSVAITFHTSPDGDSLGSALGLLQGIRKLSKKAYIISKEPIPET
CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH
FKYLPCSEEITGEIKRPIEGTECVIVLDCGNVERINAELDLENREYSLINIDHHLSNDMY
HHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHHCCCCC
GDLNFVDTNAPAVAEVVYQLLKILEINSDKDIAACLYTSLITDTGSFRYPGTTSVTHMIA
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
GDLINTGLDFSSIHRKIFENKKFERLKLYGKVLEEMYLENEKLCVMKVTEKMLKELNIED
HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCC
AKDTSDIISQGMQIGSVEVAVLFKEVEEGVKISLRSKEYVDVRKIAENFGGGGHIRASGA
CCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCC
FIKGEALNIVEKKLIETIKKELI
EEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQMITNDILDKIKESNSVAITFHTSPDGDSLGSALGLLQGIRKLSKKAYIISKEPIPET
CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH
FKYLPCSEEITGEIKRPIEGTECVIVLDCGNVERINAELDLENREYSLINIDHHLSNDMY
HHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHHCCCCC
GDLNFVDTNAPAVAEVVYQLLKILEINSDKDIAACLYTSLITDTGSFRYPGTTSVTHMIA
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
GDLINTGLDFSSIHRKIFENKKFERLKLYGKVLEEMYLENEKLCVMKVTEKMLKELNIED
HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCC
AKDTSDIISQGMQIGSVEVAVLFKEVEEGVKISLRSKEYVDVRKIAENFGGGGHIRASGA
CCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCC
FIKGEALNIVEKKLIETIKKELI
EEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]