| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380344
Identifier: 148380344
GI number: 148380344
Start: 2518904
End: 2519704
Strand: Reverse
Name: 148380344
Synonym: CBO2389
Alternate gene names: NA
Gene position: 2519704-2518904 (Counterclockwise)
Preceding gene: 148380345
Following gene: 148380343
Centisome position: 64.83
GC content: 30.96
Gene sequence:
>801_bases GTGAGTAACTTACAGATTTTTAAAAACCAGCAATTTGGAGAATTTGAATTGCTTGTAGATGAAAATAAAAAGGAATGGTT TCCAGCAACAGATATTGCCACCATATTGGGGTATTCTAATCCACAAAAGGCAATAAGAGATCACTGTAAACAAAAGGGGT GCACGATTCGTTCGGTCCTTACAAAGGGTGGCAAACAGAATAAGAAATTTATAGATGAAGGTAATCTTTATAGATTAATA ACTCATTCTGAATTACCATCCGCAGAAAAATTTGAAATTTGGATATTTGATGAAATATTGCCAACTATAAGGAAAACTGG TGGTTATGTTGCAAGCGAAGACCTATTTATTAATACTTACCTACCTTATTTGGATGAGCAAAGCAAAATGGTTTTCAGGA ACACCTTAGAAATTGTAAGGAAGCAAAATGAGATTATAGCATTAAAAGAGAAAGAAATAGAACATAAAGAAGATGTCATT GTAGGCTTAGTTGATGAAATATCATTAGCAGAGAAACGACAGATATTAAATAGAGTTGTTAGGTACAAAGGTGCAAATTA TAGAGAACGTTGGAATGAATTATATAAACAATTTGAAATGAAGTACCACATTGAAAGTATAAAAAATAAACTAGAGAAAT ATAACAAAAGCCATAAACCAAAGTTAAAAAGTAAAGTTGATTACATTGACAAGGTTATGAATAAGATACCAGAACTTTAT GAAATAGCTTGTAAACTTTATGAGAATGATGTAAGGGAACTTGCTAAAAACTTGTATTCACTTAATGAGGAGGTTGTTTA A
Upstream 100 bases:
>100_bases TTGCAAAGCATGACGTCAAAGTGACGACAGGAACTGCTTAATAAATAGTTTAAACATTTTCTTTGAAAATTACATTAGTG AACAAAAGGGAGATGAGGGA
Downstream 100 bases:
>100_bases TGAATAAAAAGATAAAAACAACGGATTTAAATTTAAATGTTTCTACAGGAACAATGATTTATGTAGATATAGATATTTTT AGATTTCTATATGACCAAGA
Product: BRO family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSNLQIFKNQQFGEFELLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVLTKGGKQNKKFIDEGNLYRLI THSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVI VGLVDEISLAEKRQILNRVVRYKGANYRERWNELYKQFEMKYHIESIKNKLEKYNKSHKPKLKSKVDYIDKVMNKIPELY EIACKLYENDVRELAKNLYSLNEEVV
Sequences:
>Translated_266_residues MSNLQIFKNQQFGEFELLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVLTKGGKQNKKFIDEGNLYRLI THSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVI VGLVDEISLAEKRQILNRVVRYKGANYRERWNELYKQFEMKYHIESIKNKLEKYNKSHKPKLKSKVDYIDKVMNKIPELY EIACKLYENDVRELAKNLYSLNEEVV >Mature_265_residues SNLQIFKNQQFGEFELLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVLTKGGKQNKKFIDEGNLYRLIT HSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVIV GLVDEISLAEKRQILNRVVRYKGANYRERWNELYKQFEMKYHIESIKNKLEKYNKSHKPKLKSKVDYIDKVMNKIPELYE IACKLYENDVRELAKNLYSLNEEVV
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 31495; Mature: 31363
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLQIFKNQQFGEFELLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVL CCCCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH TKGGKQNKKFIDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTY HCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCEECCCEEEECC LPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVIVGLVDEISLAEKRQILNRVV CCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RYKGANYRERWNELYKQFEMKYHIESIKNKLEKYNKSHKPKLKSKVDYIDKVMNKIPELY HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EIACKLYENDVRELAKNLYSLNEEVV HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNLQIFKNQQFGEFELLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVL CCCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH TKGGKQNKKFIDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTY HCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCEECCCEEEECC LPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVIVGLVDEISLAEKRQILNRVV CCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RYKGANYRERWNELYKQFEMKYHIESIKNKLEKYNKSHKPKLKSKVDYIDKVMNKIPELY HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EIACKLYENDVRELAKNLYSLNEEVV HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]