| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380288
Identifier: 148380288
GI number: 148380288
Start: 2485857
End: 2486375
Strand: Reverse
Name: 148380288
Synonym: CBO2338
Alternate gene names: NA
Gene position: 2486375-2485857 (Counterclockwise)
Preceding gene: 148380289
Following gene: 148380287
Centisome position: 63.97
GC content: 22.74
Gene sequence:
>519_bases TTGAATAGAAGATTAAGTAAAATTTCAATTTTATTAATATTTATATTTATACTTTCATTAAATTTAATGGGTTGTGGAAA TGAAACAGCTAAAGATAGTAAAGAGACTACTAAAGAAATAAAAGTTGAGAATAAAAAAGAAGAAAATAATAAAAAAACAG CAGAAATAACTAAAGGGGAATTATATGATAAAATAAATTCTATAGAAAAGGTTAAAGGAATATCTACTATAGAGGACACA GAAGTAGGATTTATAAATTTAAATATAGGTATAAATGTTACTAAAGGAACAGCAATGGAAGAATTAGATTCTTATACTAA GAAAGCTGCCAATATACAAACTAATTTAGAAAATTATTTTATTGAGAAAAAATTTGTAAGAATTGCTTATGTTATGTATG TAGATAATGAAATGAAAAGCGTTGTTGTAACATATAAAAAAGAAGATGGAAAATATATATTAGAAAATACTAGTATTGTA GATGAAAAGTATAAGAAGGCTGCAGATGCATTAAAATAA
Upstream 100 bases:
>100_bases GAAGTAGGAAGAAAAATAAAAGAAGCTTTTAAAAATATAAAGAAGTAATATAAATACCCTCCTAAATATGTTATAATATG ACAGAAAAGGAGGGGTTGTT
Downstream 100 bases:
>100_bases AAAAATAGTATAGCTAAAGAGATGCTTAAATTGTTAAGTATCTCTTTTTTATTTGAGGTGATGTGCATTGGATGTATACT TAAGAAATGAAAAAGAAAAA
Product: puattive membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNRRLSKISILLIFIFILSLNLMGCGNETAKDSKETTKEIKVENKKEENNKKTAEITKGELYDKINSIEKVKGISTIEDT EVGFINLNIGINVTKGTAMEELDSYTKKAANIQTNLENYFIEKKFVRIAYVMYVDNEMKSVVVTYKKEDGKYILENTSIV DEKYKKAADALK
Sequences:
>Translated_172_residues MNRRLSKISILLIFIFILSLNLMGCGNETAKDSKETTKEIKVENKKEENNKKTAEITKGELYDKINSIEKVKGISTIEDT EVGFINLNIGINVTKGTAMEELDSYTKKAANIQTNLENYFIEKKFVRIAYVMYVDNEMKSVVVTYKKEDGKYILENTSIV DEKYKKAADALK >Mature_172_residues MNRRLSKISILLIFIFILSLNLMGCGNETAKDSKETTKEIKVENKKEENNKKTAEITKGELYDKINSIEKVKGISTIEDT EVGFINLNIGINVTKGTAMEELDSYTKKAANIQTNLENYFIEKKFVRIAYVMYVDNEMKSVVVTYKKEDGKYILENTSIV DEKYKKAADALK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19626; Mature: 19626
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRLSKISILLIFIFILSLNLMGCGNETAKDSKETTKEIKVENKKEENNKKTAEITKGE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH LYDKINSIEKVKGISTIEDTEVGFINLNIGINVTKGTAMEELDSYTKKAANIQTNLENYF HHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH IEKKFVRIAYVMYVDNEMKSVVVTYKKEDGKYILENTSIVDEKYKKAADALK HHHHHHEEEEEEEECCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MNRRLSKISILLIFIFILSLNLMGCGNETAKDSKETTKEIKVENKKEENNKKTAEITKGE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH LYDKINSIEKVKGISTIEDTEVGFINLNIGINVTKGTAMEELDSYTKKAANIQTNLENYF HHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH IEKKFVRIAYVMYVDNEMKSVVVTYKKEDGKYILENTSIVDEKYKKAADALK HHHHHHEEEEEEEECCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA