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The map label for this gene is xkdP [H]

Identifier: 148380287

GI number: 148380287

Start: 2485136

End: 2485789

Strand: Reverse

Name: xkdP [H]

Synonym: CBO2337

Alternate gene names: 148380287

Gene position: 2485789-2485136 (Counterclockwise)

Preceding gene: 148380288

Following gene: 148380286

Centisome position: 63.95

GC content: 30.89

Gene sequence:

>654_bases
TTGGATGTATACTTAAGAAATGAAAAAGAAAAAACAACATTCCAATTTCCTGTTAATCCAATAGATAACGTAATGGTGAA
TAGGACTAAAAAATATGATACTGCTGATATAGTAGACTATGGAGAAGTAGACCTAAGCGATAAAGGTAAAAAAATAAAAG
AAATAAGTTTTAATACATTATTACCTGCTGAATATGATACTTATTGCAGATATAGAAATATTCCAATCCCTTTAGAAGTT
ATAGCTAAATTAGAGAAGTGGATGGAGCAACAAGAGCCTCTTAGATTAATAATTACAGACTTTGGGTTTAACGATCTAGT
AAATATTAGTTCTGTGAGTGAAGAGGAAAGAGGAGGAGAAACAGGAGATAAATATATAAATATTAGTTTTAGAACACATA
GGGACCTTAAAATACAAACATTAGCTTCACCTAAAACAATATCCACGGTAAAAAAGGTAGCTTTAAAGGATAATAGACCA
ACTACAAAATCTAATTCTAGAATATATGTAGTTAAGCAAGGAGATTCTCTTTGGAAGATAGCTAAGTGGTGGTATGGGAA
TAGTTCCAAATGGCAGGAAATATATAATAAAAATAGAGCTACAATAGGACCCAATCCTAATGTAATAAGACCAGGACAAA
AGTTGGTGATGTAA

Upstream 100 bases:

>100_bases
AAGTATAAGAAGGCTGCAGATGCATTAAAATAAAAAAATAGTATAGCTAAAGAGATGCTTAAATTGTTAAGTATCTCTTT
TTTATTTGAGGTGATGTGCA

Downstream 100 bases:

>100_bases
TATGGCTACTATAATACTTAGAAATAAATATAAGATAGATTCTTTATCTGAAGGAATACAGCTGAGTGAAGCTATAGATG
GTATAGCATATACTGCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDVYLRNEKEKTTFQFPVNPIDNVMVNRTKKYDTADIVDYGEVDLSDKGKKIKEISFNTLLPAEYDTYCRYRNIPIPLEV
IAKLEKWMEQQEPLRLIITDFGFNDLVNISSVSEEERGGETGDKYINISFRTHRDLKIQTLASPKTISTVKKVALKDNRP
TTKSNSRIYVVKQGDSLWKIAKWWYGNSSKWQEIYNKNRATIGPNPNVIRPGQKLVM

Sequences:

>Translated_217_residues
MDVYLRNEKEKTTFQFPVNPIDNVMVNRTKKYDTADIVDYGEVDLSDKGKKIKEISFNTLLPAEYDTYCRYRNIPIPLEV
IAKLEKWMEQQEPLRLIITDFGFNDLVNISSVSEEERGGETGDKYINISFRTHRDLKIQTLASPKTISTVKKVALKDNRP
TTKSNSRIYVVKQGDSLWKIAKWWYGNSSKWQEIYNKNRATIGPNPNVIRPGQKLVM
>Mature_217_residues
MDVYLRNEKEKTTFQFPVNPIDNVMVNRTKKYDTADIVDYGEVDLSDKGKKIKEISFNTLLPAEYDTYCRYRNIPIPLEV
IAKLEKWMEQQEPLRLIITDFGFNDLVNISSVSEEERGGETGDKYINISFRTHRDLKIQTLASPKTISTVKKVALKDNRP
TTKSNSRIYVVKQGDSLWKIAKWWYGNSSKWQEIYNKNRATIGPNPNVIRPGQKLVM

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 25199; Mature: 25199

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVYLRNEKEKTTFQFPVNPIDNVMVNRTKKYDTADIVDYGEVDLSDKGKKIKEISFNTL
CCEEECCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE
LPAEYDTYCRYRNIPIPLEVIAKLEKWMEQQEPLRLIITDFGFNDLVNISSVSEEERGGE
CCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCHHHCCCC
TGDKYINISFRTHRDLKIQTLASPKTISTVKKVALKDNRPTTKSNSRIYVVKQGDSLWKI
CCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEE
AKWWYGNSSKWQEIYNKNRATIGPNPNVIRPGQKLVM
EHEEECCCCHHHHHHCCCCEEECCCCCEECCCHHHCC
>Mature Secondary Structure
MDVYLRNEKEKTTFQFPVNPIDNVMVNRTKKYDTADIVDYGEVDLSDKGKKIKEISFNTL
CCEEECCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE
LPAEYDTYCRYRNIPIPLEVIAKLEKWMEQQEPLRLIITDFGFNDLVNISSVSEEERGGE
CCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCHHHCCCC
TGDKYINISFRTHRDLKIQTLASPKTISTVKKVALKDNRPTTKSNSRIYVVKQGDSLWKI
CCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEE
AKWWYGNSSKWQEIYNKNRATIGPNPNVIRPGQKLVM
EHEEECCCCHHHHHHCCCCEEECCCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]