Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

Click here to switch to the map view.

The map label for this gene is 148380165

Identifier: 148380165

GI number: 148380165

Start: 2367353

End: 2368738

Strand: Direct

Name: 148380165

Synonym: CBO2212

Alternate gene names: NA

Gene position: 2367353-2368738 (Clockwise)

Preceding gene: 148380156

Following gene: 148380167

Centisome position: 60.91

GC content: 30.16

Gene sequence:

>1386_bases
ATGAGTAAAAGAAGAGCTAAAGGTAAAAATCATATTAGACCTAGTGTTATAGGGTTATTAGGCATACTTATACTCTATGT
ATGTATGGTATTATACTTTAGAAATCATTTTTATTTTAGGACAACTATCAATGGTATTAAAGCTTCAGGTAAAACTGTAG
AAGAAGTTAATAAGACAATGGAAAGTGGGGTGAAAAATTACGCACTACAGTTAGAAGGTAGAGACGGGGCTAAAGAAAGG
ATTTCAGCAAAGGACTTTAATCTCAAATATAATACTAATAATGAAATTAAAAGACTAAAAGATGCTCAGAATCCTTTTAA
TATATTTAAGGGTATTTTTACCAAAAAGGAACATGAAATACCTAGAACCATTTCTTATGATGAGAAGCTATTAACACAAC
ATATTGATAAAATGGTTTTTTTTAATGAAGGTAAAATAACTAATCCTAAAAATGCTAGTTTAAAATATACAGGTAAAGAC
TATGAAATTGTACCAGAAATTATGGGTAATAAAGTTAAAAAAGATACACTGTATAAAGAAATAAAAAATGCAATAATTAA
AGATAAAAAAATTATAAATTTAGAAGAAAGTGGCTGTTACGAAAATCCAAAATATACTTCAAAGTCAAAAGAAGTCATTG
AAGCACAAAAAACTATGAACAAATATTTACAATCAGAAATAACTTATGATATTAGAGGAAATAAAGAAGTAGTCAATGCT
TCTACAATAAGTAATTGGCTTAAAACAGATGAAAAATTTAATCCTTATATAGATAAAGAAAAGGTAAGGGCTTATATGGA
TAATTTAGCCTATACATATAATACGATAGGGAAAACAAGGGATTTTGTCACAGCAACAGGAGAACATATAAAAGTAAGTG
GAGGAAGTTATGGTTGGGCTATTGATAGGCCTAAAGAAACGGAAAATTTAGTACAAGCTATAAAAGAAGGAAAAGCTGTA
AATAAAAAACCTAGCTATGCTCAAACTACACCTTATACCAGCGGTGATGACATAGGAAACACTTATGTAGAAATCGATCT
AACAAAACAACATTTATGGTTTTTTAAAAATGGAAATGTTGTTGTTGATGGAAGTATTGTTACCGGTAATGTAAGCGCAA
ATTATGCAACCCCTGAAGGCGTTTATAAACTAGATTATAAGGAAAGAAATGCTGTATTAAGAGGAGAAGGATATGCTGCT
CCTGTTGATTATTGGATGCCTTTTAATGGTGGTATTGGTATGCATGATGCTTCTTGGAGGAAGGAATTTGGAGGAACTAT
TTATCAAAATGGTGGTTCTCATGGCTGTGTAAATTGTTCCCATGCTTTAGCACAAACTATATTTGAAACTATAGAACCAG
GTACTCCAGTTATTTGCCATAAATAA

Upstream 100 bases:

>100_bases
TATATAAAAAATATATAAAATTTCTATAAATCGATTGAAAAAACAATGGAAAATGTTATATATTATATATGTTAACTAAA
GTTTAGGAGGCATCTTTTTA

Downstream 100 bases:

>100_bases
TAAGACAAATGGTCTTTACAGTTTATTTAGTTTTTTTATCCATATACAAATATAGTATGAGATAAAAACTTCGGTAACTT
TTTAAAGGGACTATCCCAAA

Product: exported protein

Products: NA

Alternate protein names: Secreted Protein; ErfK Family Protein; YkuD Domain-Containing Protein; Ykud Domain-Containing Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Extracellular Protein

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSKRRAKGKNHIRPSVIGLLGILILYVCMVLYFRNHFYFRTTINGIKASGKTVEEVNKTMESGVKNYALQLEGRDGAKER
ISAKDFNLKYNTNNEIKRLKDAQNPFNIFKGIFTKKEHEIPRTISYDEKLLTQHIDKMVFFNEGKITNPKNASLKYTGKD
YEIVPEIMGNKVKKDTLYKEIKNAIIKDKKIINLEESGCYENPKYTSKSKEVIEAQKTMNKYLQSEITYDIRGNKEVVNA
STISNWLKTDEKFNPYIDKEKVRAYMDNLAYTYNTIGKTRDFVTATGEHIKVSGGSYGWAIDRPKETENLVQAIKEGKAV
NKKPSYAQTTPYTSGDDIGNTYVEIDLTKQHLWFFKNGNVVVDGSIVTGNVSANYATPEGVYKLDYKERNAVLRGEGYAA
PVDYWMPFNGGIGMHDASWRKEFGGTIYQNGGSHGCVNCSHALAQTIFETIEPGTPVICHK

Sequences:

>Translated_461_residues
MSKRRAKGKNHIRPSVIGLLGILILYVCMVLYFRNHFYFRTTINGIKASGKTVEEVNKTMESGVKNYALQLEGRDGAKER
ISAKDFNLKYNTNNEIKRLKDAQNPFNIFKGIFTKKEHEIPRTISYDEKLLTQHIDKMVFFNEGKITNPKNASLKYTGKD
YEIVPEIMGNKVKKDTLYKEIKNAIIKDKKIINLEESGCYENPKYTSKSKEVIEAQKTMNKYLQSEITYDIRGNKEVVNA
STISNWLKTDEKFNPYIDKEKVRAYMDNLAYTYNTIGKTRDFVTATGEHIKVSGGSYGWAIDRPKETENLVQAIKEGKAV
NKKPSYAQTTPYTSGDDIGNTYVEIDLTKQHLWFFKNGNVVVDGSIVTGNVSANYATPEGVYKLDYKERNAVLRGEGYAA
PVDYWMPFNGGIGMHDASWRKEFGGTIYQNGGSHGCVNCSHALAQTIFETIEPGTPVICHK
>Mature_460_residues
SKRRAKGKNHIRPSVIGLLGILILYVCMVLYFRNHFYFRTTINGIKASGKTVEEVNKTMESGVKNYALQLEGRDGAKERI
SAKDFNLKYNTNNEIKRLKDAQNPFNIFKGIFTKKEHEIPRTISYDEKLLTQHIDKMVFFNEGKITNPKNASLKYTGKDY
EIVPEIMGNKVKKDTLYKEIKNAIIKDKKIINLEESGCYENPKYTSKSKEVIEAQKTMNKYLQSEITYDIRGNKEVVNAS
TISNWLKTDEKFNPYIDKEKVRAYMDNLAYTYNTIGKTRDFVTATGEHIKVSGGSYGWAIDRPKETENLVQAIKEGKAVN
KKPSYAQTTPYTSGDDIGNTYVEIDLTKQHLWFFKNGNVVVDGSIVTGNVSANYATPEGVYKLDYKERNAVLRGEGYAAP
VDYWMPFNGGIGMHDASWRKEFGGTIYQNGGSHGCVNCSHALAQTIFETIEPGTPVICHK

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52284; Mature: 52153

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRRAKGKNHIRPSVIGLLGILILYVCMVLYFRNHFYFRTTINGIKASGKTVEEVNKTM
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHH
ESGVKNYALQLEGRDGAKERISAKDFNLKYNTNNEIKRLKDAQNPFNIFKGIFTKKEHEI
HCCHHEEEEEEECCCCHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHCCHHCCC
PRTISYDEKLLTQHIDKMVFFNEGKITNPKNASLKYTGKDYEIVPEIMGNKVKKDTLYKE
CCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCEECHHHHCCCHHHHHHHHH
IKNAIIKDKKIINLEESGCYENPKYTSKSKEVIEAQKTMNKYLQSEITYDIRGNKEVVNA
HHHHHHCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEH
STISNWLKTDEKFNPYIDKEKVRAYMDNLAYTYNTIGKTRDFVTATGEHIKVSGGSYGWA
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCC
IDRPKETENLVQAIKEGKAVNKKPSYAQTTPYTSGDDIGNTYVEIDLTKQHLWFFKNGNV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCE
VVDGSIVTGNVSANYATPEGVYKLDYKERNAVLRGEGYAAPVDYWMPFNGGIGMHDASWR
EEECEEEECCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCHHH
KEFGGTIYQNGGSHGCVNCSHALAQTIFETIEPGTPVICHK
HHHCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
SKRRAKGKNHIRPSVIGLLGILILYVCMVLYFRNHFYFRTTINGIKASGKTVEEVNKTM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHH
ESGVKNYALQLEGRDGAKERISAKDFNLKYNTNNEIKRLKDAQNPFNIFKGIFTKKEHEI
HCCHHEEEEEEECCCCHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHCCHHCCC
PRTISYDEKLLTQHIDKMVFFNEGKITNPKNASLKYTGKDYEIVPEIMGNKVKKDTLYKE
CCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCEECHHHHCCCHHHHHHHHH
IKNAIIKDKKIINLEESGCYENPKYTSKSKEVIEAQKTMNKYLQSEITYDIRGNKEVVNA
HHHHHHCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEH
STISNWLKTDEKFNPYIDKEKVRAYMDNLAYTYNTIGKTRDFVTATGEHIKVSGGSYGWA
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCC
IDRPKETENLVQAIKEGKAVNKKPSYAQTTPYTSGDDIGNTYVEIDLTKQHLWFFKNGNV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCE
VVDGSIVTGNVSANYATPEGVYKLDYKERNAVLRGEGYAAPVDYWMPFNGGIGMHDASWR
EEECEEEECCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCHHH
KEFGGTIYQNGGSHGCVNCSHALAQTIFETIEPGTPVICHK
HHHCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA