Click here to switch to the map view.

The map label for this gene is 148380049

Identifier: 148380049

GI number: 148380049

Start: 2230209

End: 2231063

Strand: Reverse

Name: 148380049

Synonym: CBO2093

Alternate gene names: NA

Gene position: 2231063-2230209 (Counterclockwise)

Preceding gene: 148380050

Following gene: 148380048

Centisome position: 57.4

GC content: 30.06

Gene sequence:

>855_bases
ATGACGCCTTACAAATTTGCAAAAGAAACGAATTTGGATATAAATGAGAGTACAAGTTTTCTTCACAGTTTGTATAAATA
CGAATTTGCATTGATAAAAATAAATGTCAAGTGTCCAGAATGTAAGTTTCAAAATACGATATATCTAGATGAAAATTTTA
ACGAGACAAGTTGCGTAGAATGTGAAGGCCCTATAGATAAACGGCATATTAAAAATGGAGAACTGATTTATGTATTGAAG
GATGAATGTTTTGGATATTTTAAAGATAAGGCTCTACAGCAAAAAAAAGTATTAGATCCAATGAATTTATTATTAAAAGA
TACGCCATATATTTTTTCAAAAGAGAATAATGTAATAAACATGGAGGATTATAGTGATATTATGATAGGAGAAGTAAAAA
AAGAAATAAAAAAACCTAAAATTTTTATAGGAAGTTCTAAGGAACATTTGGACGTAGCGTATTCTCTTCAAGAAGCATTA
GAATATTCTGCGGAGCCTACTGTTTGGACTCAAGGAATATTCAAACTTTCTAGTAATACCCTTGATGATCTTTATAATAA
CATCAAAGGAATGGATGCAGGAATATTCATTTTCACACCTGATGATATTTCAGATATAAGAGAAAATAGCGTTAGTGTAG
TAAGAGACAATGTTATATTTGAATTAGGGTTGGCCATTGGAATACTTGGAAAACAAAATGTTTTTTACATAATACCAAGA
GGCTGTGATTTTCATATTCCATCGGATTTGGCTGGGATAACTCCTGGTGATTATGATGCCAATAGATCTGATGATAATTT
AGTAGCGGCATTAGGTCCTGTTGTTACAAAAATTATGAAACAATTAAAAAATTAA

Upstream 100 bases:

>100_bases
TTTGAATATGTTTTGGAAAAATATGAAGAAATTGAATCAGGAGACATTGATAAAGTTCAAAAGTTGGATAAAGGATGCGC
CAATTGAGTTATTACATAAT

Downstream 100 bases:

>100_bases
TTTTTATCAATGACTAAAATATTTTAATATTTAACATAAATTATTATAGATTTTATAGCTGAAGTCAAACAGTATTTTGC
ATTTAGACGTGTAACAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTPYKFAKETNLDINESTSFLHSLYKYEFALIKINVKCPECKFQNTIYLDENFNETSCVECEGPIDKRHIKNGELIYVLK
DECFGYFKDKALQQKKVLDPMNLLLKDTPYIFSKENNVINMEDYSDIMIGEVKKEIKKPKIFIGSSKEHLDVAYSLQEAL
EYSAEPTVWTQGIFKLSSNTLDDLYNNIKGMDAGIFIFTPDDISDIRENSVSVVRDNVIFELGLAIGILGKQNVFYIIPR
GCDFHIPSDLAGITPGDYDANRSDDNLVAALGPVVTKIMKQLKN

Sequences:

>Translated_284_residues
MTPYKFAKETNLDINESTSFLHSLYKYEFALIKINVKCPECKFQNTIYLDENFNETSCVECEGPIDKRHIKNGELIYVLK
DECFGYFKDKALQQKKVLDPMNLLLKDTPYIFSKENNVINMEDYSDIMIGEVKKEIKKPKIFIGSSKEHLDVAYSLQEAL
EYSAEPTVWTQGIFKLSSNTLDDLYNNIKGMDAGIFIFTPDDISDIRENSVSVVRDNVIFELGLAIGILGKQNVFYIIPR
GCDFHIPSDLAGITPGDYDANRSDDNLVAALGPVVTKIMKQLKN
>Mature_283_residues
TPYKFAKETNLDINESTSFLHSLYKYEFALIKINVKCPECKFQNTIYLDENFNETSCVECEGPIDKRHIKNGELIYVLKD
ECFGYFKDKALQQKKVLDPMNLLLKDTPYIFSKENNVINMEDYSDIMIGEVKKEIKKPKIFIGSSKEHLDVAYSLQEALE
YSAEPTVWTQGIFKLSSNTLDDLYNNIKGMDAGIFIFTPDDISDIRENSVSVVRDNVIFELGLAIGILGKQNVFYIIPRG
CDFHIPSDLAGITPGDYDANRSDDNLVAALGPVVTKIMKQLKN

Specific function: Unknown

COG id: COG4271

COG function: function code K; Predicted nucleotide-binding protein containing TIR -like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32289; Mature: 32158

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYKFAKETNLDINESTSFLHSLYKYEFALIKINVKCPECKFQNTIYLDENFNETSCVE
CCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEE
CEGPIDKRHIKNGELIYVLKDECFGYFKDKALQQKKVLDPMNLLLKDTPYIFSKENNVIN
ECCCCCHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCEEE
MEDYSDIMIGEVKKEIKKPKIFIGSSKEHLDVAYSLQEALEYSAEPTVWTQGIFKLSSNT
CCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
LDDLYNNIKGMDAGIFIFTPDDISDIRENSVSVVRDNVIFELGLAIGILGKQNVFYIIPR
HHHHHHHCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHEEEHHHHEEECCCCEEEEEEC
GCDFHIPSDLAGITPGDYDANRSDDNLVAALGPVVTKIMKQLKN
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPYKFAKETNLDINESTSFLHSLYKYEFALIKINVKCPECKFQNTIYLDENFNETSCVE
CCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEE
CEGPIDKRHIKNGELIYVLKDECFGYFKDKALQQKKVLDPMNLLLKDTPYIFSKENNVIN
ECCCCCHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCEEE
MEDYSDIMIGEVKKEIKKPKIFIGSSKEHLDVAYSLQEALEYSAEPTVWTQGIFKLSSNT
CCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
LDDLYNNIKGMDAGIFIFTPDDISDIRENSVSVVRDNVIFELGLAIGILGKQNVFYIIPR
HHHHHHHCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHEEEHHHHEEECCCCEEEEEEC
GCDFHIPSDLAGITPGDYDANRSDDNLVAALGPVVTKIMKQLKN
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA