| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is inlA [H]
Identifier: 148379927
GI number: 148379927
Start: 2096624
End: 2097619
Strand: Direct
Name: inlA [H]
Synonym: CBO1965
Alternate gene names: 148379927
Gene position: 2096624-2097619 (Clockwise)
Preceding gene: 148379926
Following gene: 148379928
Centisome position: 53.94
GC content: 20.68
Gene sequence:
>996_bases GTGAAAAAGAGGAAGATTTCTATAATAATAGTTTGTCTAATTATAATTACATCTATAACTCTAATTTATAACCATAATAA GACTAAGAAAACTCAAACTGATAGCAATATACAAAAGGTTCAATCCAAAAAAAATTCATCTGGAACCAATATAAAGAATA ATAACAATTCTAAAAATAATTCTAAAAAAAAGGAAACTTCAGAGAAAGAAACAAATCAGAATTCAAAAATCAATAAAGAT GAAATATCTAGTGTTATTAAAAATAATGATGCCAAAAACTTAGATAATGTGAAAAATTTAGATAAAATATCCTCATTAGA AATTATTGATAGTGGTATAGAACATATAGATAAATTAAAAGGAAAAGAAAATATTAAAGCTTTAAAAATAGTTCACTGCA ATATAAAAGATTTAGAAATTATATCTACATTAAAAAATCTCGAAAACTTAGAAATTATAGATTGTAATTTAAATGATGTA TCAATAGTTAAAAACTTAAAACAATTAAAAAGATTAGATATTAGCAATAATCAAGTAAGTAATTTAGAAGGAATAGGAAA CTTAACAAATTTAAAAGAGCTTTATATGTCAAACAATAATATAACAAATATAGAGCCAATGTATAAATTGCTTAAGCTAA CTAATTTAGATATTAGTGATAATAAAATTAATAACATTAAAGAATTAAAAAATATGAAATCTATTAAAGAACTTAATATT TGTAACAACAATGTATCTAGTTTAGAAGGAATAGAAAATATGGAACATCTGGTAGGTCTTTGGACCAGTAGCAATAAAAT AAATAATATTTCTATACTTTCAAATAAAAATCAAATAGTGAACTTATCATTAGATAACAACAAAATATCAGATATATCAG TTATAAGTAATCTTAAAAAATTGAAATCTCTAAAACTAGATAAAAATAATATATCCAATTATAAACCATTAAAAGGTATA TATAAAAATCTAGTTGAACCAGATTTTTCAATATAA
Upstream 100 bases:
>100_bases TATAAATTTATATAAAATCATACTTTTTATGTAAAGTCTTAAACAATAATTGCGATAATAAACAGAAAAAGTAAATTTTG AAAAAAAGGGGGTGAAAAAA
Downstream 100 bases:
>100_bases AATAAAAAGGGGGAAAAATAATGAAAAAAAATCTTTTACCAAAACTGGTCTTACCAATTTTAGTTGCATCATCTACTATT ATAGGAGCAAATCAAACCAA
Product: leucine-rich repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKKRKISIIIVCLIIITSITLIYNHNKTKKTQTDSNIQKVQSKKNSSGTNIKNNNNSKNNSKKKETSEKETNQNSKINKD EISSVIKNNDAKNLDNVKNLDKISSLEIIDSGIEHIDKLKGKENIKALKIVHCNIKDLEIISTLKNLENLEIIDCNLNDV SIVKNLKQLKRLDISNNQVSNLEGIGNLTNLKELYMSNNNITNIEPMYKLLKLTNLDISDNKINNIKELKNMKSIKELNI CNNNVSSLEGIENMEHLVGLWTSSNKINNISILSNKNQIVNLSLDNNKISDISVISNLKKLKSLKLDKNNISNYKPLKGI YKNLVEPDFSI
Sequences:
>Translated_331_residues MKKRKISIIIVCLIIITSITLIYNHNKTKKTQTDSNIQKVQSKKNSSGTNIKNNNNSKNNSKKKETSEKETNQNSKINKD EISSVIKNNDAKNLDNVKNLDKISSLEIIDSGIEHIDKLKGKENIKALKIVHCNIKDLEIISTLKNLENLEIIDCNLNDV SIVKNLKQLKRLDISNNQVSNLEGIGNLTNLKELYMSNNNITNIEPMYKLLKLTNLDISDNKINNIKELKNMKSIKELNI CNNNVSSLEGIENMEHLVGLWTSSNKINNISILSNKNQIVNLSLDNNKISDISVISNLKKLKSLKLDKNNISNYKPLKGI YKNLVEPDFSI >Mature_331_residues MKKRKISIIIVCLIIITSITLIYNHNKTKKTQTDSNIQKVQSKKNSSGTNIKNNNNSKNNSKKKETSEKETNQNSKINKD EISSVIKNNDAKNLDNVKNLDKISSLEIIDSGIEHIDKLKGKENIKALKIVHCNIKDLEIISTLKNLENLEIIDCNLNDV SIVKNLKQLKRLDISNNQVSNLEGIGNLTNLKELYMSNNNITNIEPMYKLLKLTNLDISDNKINNIKELKNMKSIKELNI CNNNVSSLEGIENMEHLVGLWTSSNKINNISILSNKNQIVNLSLDNNKISDISVISNLKKLKSLKLDKNNISNYKPLKGI YKNLVEPDFSI
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI4506013, Length=220, Percent_Identity=26.8181818181818, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI21389483, Length=172, Percent_Identity=34.3023255813954, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI55743114, Length=196, Percent_Identity=25.5102040816327, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI66472382, Length=131, Percent_Identity=30.5343511450382, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17536161, Length=209, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554124, Length=173, Percent_Identity=31.2138728323699, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17531555, Length=249, Percent_Identity=29.3172690763052, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI62472958, Length=246, Percent_Identity=28.8617886178862, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24650330, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007092, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650334, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650332, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281362651, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281362657, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281362655, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650336, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281362653, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI21358617, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 37477; Mature: 37477
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRKISIIIVCLIIITSITLIYNHNKTKKTQTDSNIQKVQSKKNSSGTNIKNNNNSKNN CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC SKKKETSEKETNQNSKINKDEISSVIKNNDAKNLDNVKNLDKISSLEIIDSGIEHIDKLK CHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GKENIKALKIVHCNIKDLEIISTLKNLENLEIIDCNLNDVSIVKNLKQLKRLDISNNQVS CCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHH NLEGIGNLTNLKELYMSNNNITNIEPMYKLLKLTNLDISDNKINNIKELKNMKSIKELNI CHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH CNNNVSSLEGIENMEHLVGLWTSSNKINNISILSNKNQIVNLSLDNNKISDISVISNLKK CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHH LKSLKLDKNNISNYKPLKGIYKNLVEPDFSI HHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKRKISIIIVCLIIITSITLIYNHNKTKKTQTDSNIQKVQSKKNSSGTNIKNNNNSKNN CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC SKKKETSEKETNQNSKINKDEISSVIKNNDAKNLDNVKNLDKISSLEIIDSGIEHIDKLK CHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GKENIKALKIVHCNIKDLEIISTLKNLENLEIIDCNLNDVSIVKNLKQLKRLDISNNQVS CCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHH NLEGIGNLTNLKELYMSNNNITNIEPMYKLLKLTNLDISDNKINNIKELKNMKSIKELNI CHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH CNNNVSSLEGIENMEHLVGLWTSSNKINNISILSNKNQIVNLSLDNNKISDISVISNLKK CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHH LKSLKLDKNNISNYKPLKGIYKNLVEPDFSI HHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]