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The map label for this gene is xerC [C]

Identifier: 148379832

GI number: 148379832

Start: 1996921

End: 1997715

Strand: Reverse

Name: xerC [C]

Synonym: CBO1871

Alternate gene names: 148379832

Gene position: 1997715-1996921 (Counterclockwise)

Preceding gene: 148379833

Following gene: 148379831

Centisome position: 51.4

GC content: 24.91

Gene sequence:

>795_bases
ATGAGGTATCTTGAAGAAGAAAAGAATATTATAGATATTAATAAGATTAATAAAGAAATCGTCCAAGAATATATTATGTT
TACAAGAAATAGAGGCAAATATAGTTTCGTTGCAAGCATAGATGGAATGATTAAAGCTAACATTGATAAAAGAAGTGATA
TAGGAGAACAAGTATCAGATGCTACATTAAATAATTATTTAAGAAATATTAAAGTGTTTTTTTATTGGTTAGATGAGAAT
CATATAATTAAAAAGAATACAGTATGTAAATGTAAATTTTTAAAAACTGAGAGAAAAAGTAAAGAACAATTAACAGATGA
AGAATTTAAAAAATTAACAAGATCAATAAACATTACAAAATTTCATGAATATAGGGACTTTGTTATTAACTTAATCATAG
ATACAGGTATGAGATTAAGCGAAACATTACATTTAACAATAAATGATGTAGACTTTAGTAGAAGAACTATTCTAATTCCA
GCAGAAATAAATAAAGGACGTAAAGATAGAGTTATTTTTTATGGTAACACGATGTCTAAATTACTACATCGTTGGATTAG
GTTTAAAGACATATATCAAGAAACAGAATTGTTGTTTCCTACACATAGAACCAACACAATATTAAGAAGTTGTGATAGTA
CTGATTTTATAACATTTGCAGAAGATTTATTTCATCAGCAGTTTTATCTTGTGAAAGTGAAACAGCGATTTCGTTTGCTA
ATTTTAGCAAATCCTCAGTACTTAAATTATTTATATATGTCATTGTTATACCTAATTAAAAATAATAATACATAA

Upstream 100 bases:

>100_bases
GAAAATAGTTGATTTAATTGAAGATTTTTTAGAATATTGCAGTTATAAAAATTTACCCAATAAGACTATAAAATCATATA
ATCAAACATTAGTTTTATTT

Downstream 100 bases:

>100_bases
TAGATAGTATGATTATTATATAAATAATATAAGTATAATGTGTTTAAATAGCAAATAAATATGGATTATGGAAAAAGTAA
CAATTCTGATGGGAAAGTAA

Product: DNA integration/recombination protein

Products: NA

Alternate protein names: DNA Integration/Recombination Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Integrase; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRYLEEEKNIIDINKINKEIVQEYIMFTRNRGKYSFVASIDGMIKANIDKRSDIGEQVSDATLNNYLRNIKVFFYWLDEN
HIIKKNTVCKCKFLKTERKSKEQLTDEEFKKLTRSINITKFHEYRDFVINLIIDTGMRLSETLHLTINDVDFSRRTILIP
AEINKGRKDRVIFYGNTMSKLLHRWIRFKDIYQETELLFPTHRTNTILRSCDSTDFITFAEDLFHQQFYLVKVKQRFRLL
ILANPQYLNYLYMSLLYLIKNNNT

Sequences:

>Translated_264_residues
MRYLEEEKNIIDINKINKEIVQEYIMFTRNRGKYSFVASIDGMIKANIDKRSDIGEQVSDATLNNYLRNIKVFFYWLDEN
HIIKKNTVCKCKFLKTERKSKEQLTDEEFKKLTRSINITKFHEYRDFVINLIIDTGMRLSETLHLTINDVDFSRRTILIP
AEINKGRKDRVIFYGNTMSKLLHRWIRFKDIYQETELLFPTHRTNTILRSCDSTDFITFAEDLFHQQFYLVKVKQRFRLL
ILANPQYLNYLYMSLLYLIKNNNT
>Mature_264_residues
MRYLEEEKNIIDINKINKEIVQEYIMFTRNRGKYSFVASIDGMIKANIDKRSDIGEQVSDATLNNYLRNIKVFFYWLDEN
HIIKKNTVCKCKFLKTERKSKEQLTDEEFKKLTRSINITKFHEYRDFVINLIIDTGMRLSETLHLTINDVDFSRRTILIP
AEINKGRKDRVIFYGNTMSKLLHRWIRFKDIYQETELLFPTHRTNTILRSCDSTDFITFAEDLFHQQFYLVKVKQRFRLL
ILANPQYLNYLYMSLLYLIKNNNT

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31789; Mature: 31789

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLEEEKNIIDINKINKEIVQEYIMFTRNRGKYSFVASIDGMIKANIDKRSDIGEQVSD
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHH
ATLNNYLRNIKVFFYWLDENHIIKKNTVCKCKFLKTERKSKEQLTDEEFKKLTRSINITK
HHHHHHHHEEEEEEEEECCCEEEECCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCEE
FHEYRDFVINLIIDTGMRLSETLHLTINDVDFSRRTILIPAEINKGRKDRVIFYGNTMSK
HHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCHHHH
LLHRWIRFKDIYQETELLFPTHRTNTILRSCDSTDFITFAEDLFHQQFYLVKVKQRFRLL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCEEEE
ILANPQYLNYLYMSLLYLIKNNNT
EEECCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYLEEEKNIIDINKINKEIVQEYIMFTRNRGKYSFVASIDGMIKANIDKRSDIGEQVSD
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHH
ATLNNYLRNIKVFFYWLDENHIIKKNTVCKCKFLKTERKSKEQLTDEEFKKLTRSINITK
HHHHHHHHEEEEEEEEECCCEEEECCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCEE
FHEYRDFVINLIIDTGMRLSETLHLTINDVDFSRRTILIPAEINKGRKDRVIFYGNTMSK
HHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCHHHH
LLHRWIRFKDIYQETELLFPTHRTNTILRSCDSTDFITFAEDLFHQQFYLVKVKQRFRLL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCEEEE
ILANPQYLNYLYMSLLYLIKNNNT
EEECCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA