| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379821
Identifier: 148379821
GI number: 148379821
Start: 1984564
End: 1985622
Strand: Reverse
Name: 148379821
Synonym: CBO1861
Alternate gene names: NA
Gene position: 1985622-1984564 (Counterclockwise)
Preceding gene: 148379822
Following gene: 148379820
Centisome position: 51.08
GC content: 29.37
Gene sequence:
>1059_bases TTGAAAAAAATCGGGCAAGTTTTATTGGGCATAATTATTTTAGTTATATTAATTATAGCAGGATATATCTTATTTATGAC AGTAACGGATTATAAACCAGAGGATAAGATTCACTTATCTATTGAAGGACAAACAGAGGATAGATTAAACTTAAAGGACA GTTTTTCCATAGTTACTTTTAATATAGGCTATGGTGGTATGGATGATAAACAAGATTTTTTTATGGATGGAGGTAAAGGT TCCAGATCATCTAGCAAAGAAAAAACCATGGAAAATATGAGGGGAATTACGAGTTTTTTGAAGAAAGATAACAGCTCTTT TATATTTTTACAAGAGGTAGACACTAATTCAACTAGAAGTTTTAGAATAGATCAATATGATTACTTAAAAAATAGCTTGA AAGCATATTCTTCAAGTATGGCATTAAATTATAAAACGCCTTGGGTACCAGTACCTATATTGAAACCACATGGGACTGTT AATGCAGGATTAGTAAATTTATCTAAGTATAAAATTAATTCAGCCACTAGATATCAATATCCAGGTAAAGAAAGTTGGCC AAGACAATTAGCAGAATTAGATAGATGTTTTTTAGAATCTAGAGTATCTCTAGAAAATAATAGGGAATTAGTTCTTATAA ATTCTCATCTATCTGCTTATGATAAAGGTGGCAAAATAAGAAAGCAACAACTTTCTTTTTTAAAAAATTATATAATAAAA GAATATAAAAAAGGGAATTATATTATAGTAGGTGGAGATTGGAATCACTTAATACCGGGAACGGATCCTTTAATGTTTAA AACTACAGAAAAGTGGCCAGATTGGCTTCAAAAAATACCTAACGATTTTAAACCAGAGGGATTTAAGTGGGTAGCAGATA AAAATGTTCCAACCACTCGAACAGATGCTACACCTTATAAAAAAGGAGAAAACTTTACAGCTGTTATAGATGGATTTTTA GTATCAGATAATATAGAAGCTACAAGTGTAAAAGCTTATTCAATGGAATTTAAAAATACAGATCATAATCCTGTTAAGAT GGAATTTAAATTAAAATAA
Upstream 100 bases:
>100_bases TTACACAATAAGCTTTAGGTTTATTGTGTTTTTTATTGATAATTTTATCCAATTAAAATATACTTAGAATATATAAAGGG AAAGAGGATGGTGCTTAAAG
Downstream 100 bases:
>100_bases TTCTTAAGGACCATTAACATATTTAAATATAAAATAGGTTAATGGTCCTAACACGTTAGGTAATATATAAAAAGAAATTT TAGCTTAAAGTGAAATATTA
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease-Exonuclease-Phosphatase Family Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKKIGQVLLGIIILVILIIAGYILFMTVTDYKPEDKIHLSIEGQTEDRLNLKDSFSIVTFNIGYGGMDDKQDFFMDGGKG SRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNSTRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTV NAGLVNLSKYKINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQLSFLKNYIIK EYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFL VSDNIEATSVKAYSMEFKNTDHNPVKMEFKLK
Sequences:
>Translated_352_residues MKKIGQVLLGIIILVILIIAGYILFMTVTDYKPEDKIHLSIEGQTEDRLNLKDSFSIVTFNIGYGGMDDKQDFFMDGGKG SRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNSTRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTV NAGLVNLSKYKINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQLSFLKNYIIK EYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFL VSDNIEATSVKAYSMEFKNTDHNPVKMEFKLK >Mature_352_residues MKKIGQVLLGIIILVILIIAGYILFMTVTDYKPEDKIHLSIEGQTEDRLNLKDSFSIVTFNIGYGGMDDKQDFFMDGGKG SRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNSTRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTV NAGLVNLSKYKINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQLSFLKNYIIK EYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFL VSDNIEATSVKAYSMEFKNTDHNPVKMEFKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40335; Mature: 40335
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIGQVLLGIIILVILIIAGYILFMTVTDYKPEDKIHLSIEGQTEDRLNLKDSFSIVTF CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEE NIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNSTRS ECCCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE FRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKYKINSATRYQY EECCHHHHHHHHHHHHHHCEEEECCCCCEEECEECCCCCCCCCEEEEEEEEECCCEEECC PGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQLSFLKNYIIK CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHH EYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTR HHCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC TDATPYKKGENFTAVIDGFLVSDNIEATSVKAYSMEFKNTDHNPVKMEFKLK CCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MKKIGQVLLGIIILVILIIAGYILFMTVTDYKPEDKIHLSIEGQTEDRLNLKDSFSIVTF CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEE NIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNSTRS ECCCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE FRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKYKINSATRYQY EECCHHHHHHHHHHHHHHCEEEECCCCCEEECEECCCCCCCCCEEEEEEEEECCCEEECC PGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQLSFLKNYIIK CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHH EYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTR HHCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC TDATPYKKGENFTAVIDGFLVSDNIEATSVKAYSMEFKNTDHNPVKMEFKLK CCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA