| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379687
Identifier: 148379687
GI number: 148379687
Start: 1845883
End: 1846848
Strand: Direct
Name: 148379687
Synonym: CBO1728
Alternate gene names: NA
Gene position: 1845883-1846848 (Clockwise)
Preceding gene: 148379686
Following gene: 148379688
Centisome position: 47.49
GC content: 32.82
Gene sequence:
>966_bases ATGGGAACAAAATTAAGTGATGTAATTGTACCAGAATTATTTAATCCTTATGTGGTTAATAGAACAATGGAGAAGAGTGC TTTAGTACAAAGTGGGATTATAACAAATAACAGTGAATTTGATGGTCTAGCAAGTCAAGCTTCACCTTTAATTAATATGC CATTCTTCGAGGATTTAACAGGAGAATCAGAGCAAATAATTGAAGATACAGACTTAGAAGCAGCTAAGATTACAAGTAAT AAAGATGTAGCGGCTATTTTAAGAAGGGCTAAAATGTGGAGTGCTACAGATTTATCAGCAGCGTTAGCAGGTAAGGACCC AATGGCAGCTATAGGAGAATTAGTAAGTGGATTTTGGACTAGAGATATGCAAAAAGAGTTAATCGCAATACTTAAAGGTA TATTTTTAAGTACATCAATGAAAAATAATTTACTTGATATATCAGCTATGACAGAAGGAGCAGCTAAGTGGTCAGCAAGT GCTTTTATAGATGCTCAACAAATGCTAGGAGATGCGCAAGAACTTTTAACAGGTGTTATGATGCATAGTGCTGTTAAATC AGAACTTAAAAAACAAAACTTAATTCAAACTATAAGGCCATCAGATAGCGCAGAGTTTGATGTATATCAAGATAAGAGAG TAATAGTTGATGATGGCTGTCCAGTTGATGTAGGTGGTGTTTATACTACTTATTTATTTGGACAAGGAGCTTTAGCATTA GGTAATGGTAATCCAGTAGGATTTATACCAACTGAAACTGATAGAGATAAAAAGAAAGGTTCAGGTGTTGATTATTTAAT TAATAGAAAAACAATGATATTACATCCAAGAGGAGTTAAATTTACTAATGCTAAAGTAGCAAAAGTAGAAGGTCCAAGTA GAGCTGAATTACAAGAAAAAACTAACTGGGAAAGAGTATATGAACCAAAACAAATAAGAATAGTTGCATTTAAACATAAA ATATAA
Upstream 100 bases:
>100_bases CTAACAGATCAAGGTAAAATATTTAAAGAAAATCCAGAACAGGCCAAACAATTAATGGCTCAAGTTGGAATAAATCAATA ATAAAGGAGATGTGTGAAAT
Downstream 100 bases:
>100_bases GAAGGTGAGTTTAATGACTCAACTAGAAAAATTGAAGAAGCTTTTAGGAATATCCTTAGATGATGATTCTAAGGATTTTT TATTGAAATTTGTACTAGAA
Product: coat protein
Products: NA
Alternate protein names: Phage Coat Protein; Phage-Related Minor Capsid Protein; Minor Capsid Protein; Phage-Like Coat Protein; Coat Protein; Prophage Lp1 Protein; Head Protein; SPP1 Phage Coat Protein P
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGTKLSDVIVPELFNPYVVNRTMEKSALVQSGIITNNSEFDGLASQASPLINMPFFEDLTGESEQIIEDTDLEAAKITSN KDVAAILRRAKMWSATDLSAALAGKDPMAAIGELVSGFWTRDMQKELIAILKGIFLSTSMKNNLLDISAMTEGAAKWSAS AFIDAQQMLGDAQELLTGVMMHSAVKSELKKQNLIQTIRPSDSAEFDVYQDKRVIVDDGCPVDVGGVYTTYLFGQGALAL GNGNPVGFIPTETDRDKKKGSGVDYLINRKTMILHPRGVKFTNAKVAKVEGPSRAELQEKTNWERVYEPKQIRIVAFKHK I
Sequences:
>Translated_321_residues MGTKLSDVIVPELFNPYVVNRTMEKSALVQSGIITNNSEFDGLASQASPLINMPFFEDLTGESEQIIEDTDLEAAKITSN KDVAAILRRAKMWSATDLSAALAGKDPMAAIGELVSGFWTRDMQKELIAILKGIFLSTSMKNNLLDISAMTEGAAKWSAS AFIDAQQMLGDAQELLTGVMMHSAVKSELKKQNLIQTIRPSDSAEFDVYQDKRVIVDDGCPVDVGGVYTTYLFGQGALAL GNGNPVGFIPTETDRDKKKGSGVDYLINRKTMILHPRGVKFTNAKVAKVEGPSRAELQEKTNWERVYEPKQIRIVAFKHK I >Mature_320_residues GTKLSDVIVPELFNPYVVNRTMEKSALVQSGIITNNSEFDGLASQASPLINMPFFEDLTGESEQIIEDTDLEAAKITSNK DVAAILRRAKMWSATDLSAALAGKDPMAAIGELVSGFWTRDMQKELIAILKGIFLSTSMKNNLLDISAMTEGAAKWSASA FIDAQQMLGDAQELLTGVMMHSAVKSELKKQNLIQTIRPSDSAEFDVYQDKRVIVDDGCPVDVGGVYTTYLFGQGALALG NGNPVGFIPTETDRDKKKGSGVDYLINRKTMILHPRGVKFTNAKVAKVEGPSRAELQEKTNWERVYEPKQIRIVAFKHKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35224; Mature: 35093
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKLSDVIVPELFNPYVVNRTMEKSALVQSGIITNNSEFDGLASQASPLINMPFFEDLT CCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHC GESEQIIEDTDLEAAKITSNKDVAAILRRAKMWSATDLSAALAGKDPMAAIGELVSGFWT CCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH RDMQKELIAILKGIFLSTSMKNNLLDISAMTEGAAKWSASAFIDAQQMLGDAQELLTGVM HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH MHSAVKSELKKQNLIQTIRPSDSAEFDVYQDKRVIVDDGCPVDVGGVYTTYLFGQGALAL HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCHHEEEEECCCEEEE GNGNPVGFIPTETDRDKKKGSGVDYLINRKTMILHPRGVKFTNAKVAKVEGPSRAELQEK CCCCEEEEECCCCCCCHHCCCCCEEEECCCEEEECCCCCEECCCEEEEECCCCHHHHHHH TNWERVYEPKQIRIVAFKHKI CCHHHHCCCCEEEEEEEECCC >Mature Secondary Structure GTKLSDVIVPELFNPYVVNRTMEKSALVQSGIITNNSEFDGLASQASPLINMPFFEDLT CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHC GESEQIIEDTDLEAAKITSNKDVAAILRRAKMWSATDLSAALAGKDPMAAIGELVSGFWT CCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH RDMQKELIAILKGIFLSTSMKNNLLDISAMTEGAAKWSASAFIDAQQMLGDAQELLTGVM HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH MHSAVKSELKKQNLIQTIRPSDSAEFDVYQDKRVIVDDGCPVDVGGVYTTYLFGQGALAL HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCHHEEEEECCCEEEE GNGNPVGFIPTETDRDKKKGSGVDYLINRKTMILHPRGVKFTNAKVAKVEGPSRAELQEK CCCCEEEEECCCCCCCHHCCCCCEEEECCCEEEECCCCCEECCCEEEEECCCCHHHHHHH TNWERVYEPKQIRIVAFKHKI CCHHHHCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA