| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379686
Identifier: 148379686
GI number: 148379686
Start: 1845264
End: 1845863
Strand: Direct
Name: 148379686
Synonym: CBO1727
Alternate gene names: NA
Gene position: 1845264-1845863 (Clockwise)
Preceding gene: 148379685
Following gene: 148379687
Centisome position: 47.47
GC content: 28.67
Gene sequence:
>600_bases ATGGATTTAAAAGAACTTTTAGGAGAAGAACTTTATAACCAAGTTATTCAAAAGGTAGGTAATAATAAGATAGATGTAGT TAATAATGGTAACTGGATACCTAAAGATAAATTTAATACTTTAAATGAGCAACTTAAAACTGCAAATACGACTATTGGAG ATCTAAAGAAAAGTAATAAGGATAATGAAACCTTACAAACCAAAGTAGGAGAATATGAAACCAAAGTTAAAGAGTATGAA AAACAAATACAAGATATGCAATTTAATTATGCATTAGAAGGAGCTTTAAAAGGTGCCAATGTAAGAAATACAAAGGCTGT TAAAGCTCTTTTAAATTTAGAAAATGTTAAGTTAGATGGAGAAACTCTTATAGGTATTAGCGAGCAAATAGAAGAATTAA GAAAGAGTGATTCATATTTATTTTCAGAAGAACAAAAACCTAAGTTTTCAGGAGTAGAGCCCACTGATGGAAGTAAAACA CCACAAGGTTATAATCCTTGGAAAAAAGAAAGTTTTAATCTAACAGATCAAGGTAAAATATTTAAAGAAAATCCAGAACA GGCCAAACAATTAATGGCTCAAGTTGGAATAAATCAATAA
Upstream 100 bases:
>100_bases TTTTATTTTTTGCTCTTTTTAGTATTTATGAGTATAAACTGAAAGATCACAAGCAGGAGACGACCTGTAGAAAAAGGCTA GTAGGAAAGGAGAAATTAAT
Downstream 100 bases:
>100_bases TAAAGGAGATGTGTGAAATATGGGAACAAAATTAAGTGATGTAATTGTACCAGAATTATTTAATCCTTATGTGGTTAATA GAACAATGGAGAAGAGTGCT
Product: scaffold protein
Products: NA
Alternate protein names: Scaffold Protein; Phage Minor Protein GP; Scaffolding Protein; Scaffold Protein Gp; Phage-Like Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDLKELLGEELYNQVIQKVGNNKIDVVNNGNWIPKDKFNTLNEQLKTANTTIGDLKKSNKDNETLQTKVGEYETKVKEYE KQIQDMQFNYALEGALKGANVRNTKAVKALLNLENVKLDGETLIGISEQIEELRKSDSYLFSEEQKPKFSGVEPTDGSKT PQGYNPWKKESFNLTDQGKIFKENPEQAKQLMAQVGINQ
Sequences:
>Translated_199_residues MDLKELLGEELYNQVIQKVGNNKIDVVNNGNWIPKDKFNTLNEQLKTANTTIGDLKKSNKDNETLQTKVGEYETKVKEYE KQIQDMQFNYALEGALKGANVRNTKAVKALLNLENVKLDGETLIGISEQIEELRKSDSYLFSEEQKPKFSGVEPTDGSKT PQGYNPWKKESFNLTDQGKIFKENPEQAKQLMAQVGINQ >Mature_199_residues MDLKELLGEELYNQVIQKVGNNKIDVVNNGNWIPKDKFNTLNEQLKTANTTIGDLKKSNKDNETLQTKVGEYETKVKEYE KQIQDMQFNYALEGALKGANVRNTKAVKALLNLENVKLDGETLIGISEQIEELRKSDSYLFSEEQKPKFSGVEPTDGSKT PQGYNPWKKESFNLTDQGKIFKENPEQAKQLMAQVGINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22590; Mature: 22590
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKELLGEELYNQVIQKVGNNKIDVVNNGNWIPKDKFNTLNEQLKTANTTIGDLKKSNK CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC DNETLQTKVGEYETKVKEYEKQIQDMQFNYALEGALKGANVRNTKAVKALLNLENVKLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECC ETLIGISEQIEELRKSDSYLFSEEQKPKFSGVEPTDGSKTPQGYNPWKKESFNLTDQGKI CCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FKENPEQAKQLMAQVGINQ CCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDLKELLGEELYNQVIQKVGNNKIDVVNNGNWIPKDKFNTLNEQLKTANTTIGDLKKSNK CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC DNETLQTKVGEYETKVKEYEKQIQDMQFNYALEGALKGANVRNTKAVKALLNLENVKLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECC ETLIGISEQIEELRKSDSYLFSEEQKPKFSGVEPTDGSKTPQGYNPWKKESFNLTDQGKI CCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FKENPEQAKQLMAQVGINQ CCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA