| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379676
Identifier: 148379676
GI number: 148379676
Start: 1838720
End: 1839235
Strand: Direct
Name: 148379676
Synonym: CBO1717
Alternate gene names: NA
Gene position: 1838720-1839235 (Clockwise)
Preceding gene: 148379675
Following gene: 148379677
Centisome position: 47.31
GC content: 25.97
Gene sequence:
>516_bases ATGGATAAAGAAACATTTAGAAAGACAGAAAGAATGTTATATAACTATTTTAAAAAAGAAGAAATAATAAAATATAAAAG AGATGTAATAGAAATCTTAAAGGATAGAATAGAACAATTAGAGAAAAGAATAAAGGATACCAATGTAAATATAGATTATG ATCTACAAGCTGTGCCATGTGGAGAGAGAGTACAAACATCTAATACAGGAGCAAGTTATGCAGAAAGAGCCATAGTGCAA GCTATAGATAGATTGATAAGAGAACAGGCGGATAAGAAGAAAGAAATACTTAATTTAGAAGAAGATATAAGTAATATAGA AAAAGAAAGTAAAGCAATAGAATTTAATATAAGAATGTTGAATGAAGAAGATAAAGAATTTATATGGCTAAAATATAAAA AGAAATTAGGAATAGAACAGATATCAGACCAATTAAATATGAGTAGAGCAACAGGATATAAAAAAAGAGAAAAGATAATA AAAGATATAGTGCATTGGATTGAAGTTATAAAATAG
Upstream 100 bases:
>100_bases GAAACAATAATATATAGTGATGGTTTTTTAGATTCTGATAATGATAAGTTAACTATGGGACAAATATTAAAAGGTGAATG GTATATAAAGGAGGGACTAA
Downstream 100 bases:
>100_bases TAGACAAAAAGTAGACAAAGTGTAGACAAATAAAGATTTTGAATGTGTTATAATAGTAGTATAGAAAAAGGATTTTATCG TACAAGGGCAACTGCAAAGC
Product: phage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDKETFRKTERMLYNYFKKEEIIKYKRDVIEILKDRIEQLEKRIKDTNVNIDYDLQAVPCGERVQTSNTGASYAERAIVQ AIDRLIREQADKKKEILNLEEDISNIEKESKAIEFNIRMLNEEDKEFIWLKYKKKLGIEQISDQLNMSRATGYKKREKII KDIVHWIEVIK
Sequences:
>Translated_171_residues MDKETFRKTERMLYNYFKKEEIIKYKRDVIEILKDRIEQLEKRIKDTNVNIDYDLQAVPCGERVQTSNTGASYAERAIVQ AIDRLIREQADKKKEILNLEEDISNIEKESKAIEFNIRMLNEEDKEFIWLKYKKKLGIEQISDQLNMSRATGYKKREKII KDIVHWIEVIK >Mature_171_residues MDKETFRKTERMLYNYFKKEEIIKYKRDVIEILKDRIEQLEKRIKDTNVNIDYDLQAVPCGERVQTSNTGASYAERAIVQ AIDRLIREQADKKKEILNLEEDISNIEKESKAIEFNIRMLNEEDKEFIWLKYKKKLGIEQISDQLNMSRATGYKKREKII KDIVHWIEVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20547; Mature: 20547
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKETFRKTERMLYNYFKKEEIIKYKRDVIEILKDRIEQLEKRIKDTNVNIDYDLQAVPC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC GERVQTSNTGASYAERAIVQAIDRLIREQADKKKEILNLEEDISNIEKESKAIEFNIRML CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEC NEEDKEFIWLKYKKKLGIEQISDQLNMSRATGYKKREKIIKDIVHWIEVIK CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDKETFRKTERMLYNYFKKEEIIKYKRDVIEILKDRIEQLEKRIKDTNVNIDYDLQAVPC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC GERVQTSNTGASYAERAIVQAIDRLIREQADKKKEILNLEEDISNIEKESKAIEFNIRML CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEC NEEDKEFIWLKYKKKLGIEQISDQLNMSRATGYKKREKIIKDIVHWIEVIK CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA