Click here to switch to the map view.

The map label for this gene is yqaN [H]

Identifier: 148379668

GI number: 148379668

Start: 1835853

End: 1836254

Strand: Direct

Name: yqaN [H]

Synonym: CBO1710

Alternate gene names: 148379668

Gene position: 1835853-1836254 (Clockwise)

Preceding gene: 148379667

Following gene: 148379669

Centisome position: 47.23

GC content: 31.09

Gene sequence:

>402_bases
TTGAAAATAGTTATAGATGGTAAACCAATGGGAAAACAAAGACCAAGGTTTAATAGTAAGACAGGGAACACATACACACC
AGATAAAACAGTTAATTATGAGAACTGGGTAAAACTATGTTACCAACAACAATGTAAGGGAGAAAAGCTTACAGGCGAGG
TTGTAGCTTTTATAAATGCTTATTATGTAATACCTAAAAGTACAAGTAAGAAAAATAAAAAAGATATGTTAGCAGGCATT
ATAAGACCAACTATAAAACCAGATGTAGACAATATAGCAAAAGTAATTTTAGATTCTTTGAATGGGTTAGCGTATAAAGA
TGATAAACAAATTGTATTTTGTGCAATAAGTAAATGGTATGGAGAGAATCCAAGAGTAGAAGTTATTTTGGAGGAAGCGT
AA

Upstream 100 bases:

>100_bases
GGGAGAGAGTTAAGAAAAACGATATATTTGCTTTGCATGGAAATAACATGGCTAGGATGCTAAGAAAAAATAGCAGAGGT
AAAAGGGGGATAGGGCAGTT

Downstream 100 bases:

>100_bases
TGAGAGAAATTAAATTTAGAGGTAAAAGTTTAGATAACAATGAATGGGTTTATGGAGGATATTATAATATGCCAGATTGC
AGAAAAGATAATCCAAGGCA

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKIVIDGKPMGKQRPRFNSKTGNTYTPDKTVNYENWVKLCYQQQCKGEKLTGEVVAFINAYYVIPKSTSKKNKKDMLAGI
IRPTIKPDVDNIAKVILDSLNGLAYKDDKQIVFCAISKWYGENPRVEVILEEA

Sequences:

>Translated_133_residues
MKIVIDGKPMGKQRPRFNSKTGNTYTPDKTVNYENWVKLCYQQQCKGEKLTGEVVAFINAYYVIPKSTSKKNKKDMLAGI
IRPTIKPDVDNIAKVILDSLNGLAYKDDKQIVFCAISKWYGENPRVEVILEEA
>Mature_133_residues
MKIVIDGKPMGKQRPRFNSKTGNTYTPDKTVNYENWVKLCYQQQCKGEKLTGEVVAFINAYYVIPKSTSKKNKKDMLAGI
IRPTIKPDVDNIAKVILDSLNGLAYKDDKQIVFCAISKWYGENPRVEVILEEA

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008822 [H]

Pfam domain/function: PF05866 RusA [H]

EC number: NA

Molecular weight: Translated: 15119; Mature: 15119

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVIDGKPMGKQRPRFNSKTGNTYTPDKTVNYENWVKLCYQQQCKGEKLTGEVVAFINA
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHEEHE
YYVIPKSTSKKNKKDMLAGIIRPTIKPDVDNIAKVILDSLNGLAYKDDKQIVFCAISKWY
EEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEHHH
GENPRVEVILEEA
CCCCCEEEEEECC
>Mature Secondary Structure
MKIVIDGKPMGKQRPRFNSKTGNTYTPDKTVNYENWVKLCYQQQCKGEKLTGEVVAFINA
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHEEHE
YYVIPKSTSKKNKKDMLAGIIRPTIKPDVDNIAKVILDSLNGLAYKDDKQIVFCAISKWY
EEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEHHH
GENPRVEVILEEA
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]