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The map label for this gene is int [H]

Identifier: 148379636

GI number: 148379636

Start: 1822764

End: 1823813

Strand: Reverse

Name: int [H]

Synonym: CBO1679

Alternate gene names: 148379636

Gene position: 1823813-1822764 (Counterclockwise)

Preceding gene: 148379637

Following gene: 148379630

Centisome position: 46.92

GC content: 26.29

Gene sequence:

>1050_bases
ATGGCTGTTTATAAAAATGAAGAAAGAGGAACTTATTTTTGTACTTTTTATTACACTGATTGGACAGGTAAAAGGAAAAG
AAAAAAGAAAGAAGGATTTAAGAAGAAAAAAGAGGCTGCAGATTTTGAAAGAGAATTTTTAAATAAACAGAAAAATAATT
GTGATATGAATTTTAAAGAACTTTCAGATTTATATTTAGAACATTCAAAGACTAGAATAAGAGTAACAACTTTTCAAGTT
AAAGAAATAATTATAAAAGAAAGAATATTACCTTATTTTAAAGATATGAATGTAAATAACATTACACCTAACAATATTAG
AAAATGGCAAAATAAGCTTATGAGTAAAGATTACAAACAAACGTATTTAAAAGCAGTAAATAAACAACTTAATGCAATCT
TTAATTTTGCTATAAAGTATTATAATTTAAATAGTAATCCTGCTTTAAAGGCTGGACCAATGGGCAAGAAAGATTCTGAA
GGTATGCAATTTTGGACTTTGGAAGAGTATAAAGAATTTATAAAGTGTGTTGATAATCCTATGTGTAAATTAGCCTTTGA
GATATTATTTTGGACAGGTTTAAGAAAGGGAGAACTAGAAGCACTCACATTTAGTGATATAGATACTAAAAATAAAATTA
TATCTATTACCAAAACATATACTAGAATAAATAAAAAAGATATAATAAATCCTCCTAAAACTCCAAAGAGTAAAAGGAAA
GTATCTATATCAGACTTCCTATGTGAAGATATAGAAAATTATAAGAAGAAATTATATAACTTTGATAAGAATGAAAGAAT
ATTCCCAGTAGGTAGACACATTTTAAAAAACTCAATGAGAGATGCATGTGAGAAAAGCAGTGTAAAAGAAATAAGGATTC
ATGATCTAAGACATTCCCATGCTAGCTTACTTATAGAACTTGGATTTAGTCCTTTATTAATTAAAGAAAGGCTAGGACAT
GAGAATATTCAAACTACATTAGATACTTATTCACATCTTTATCCTAACAAAGGTGCTTCTATAGCTGATAAATTAGATGA
TTTATTTTAG

Upstream 100 bases:

>100_bases
ATGACAATAGGCAAACTAAAAAAATTATCTCATGCTTTACAAGTTCATCCTGTAAAGCTTTTAGAAATATTATTGAAAGA
AGAAAGGAAAGGGAAAAAAA

Downstream 100 bases:

>100_bases
TACGCTTTTAGTACGTTCTTAAAATTTATAACATGGCAAACGTTGATATATAGAGGATTAAAAGGATTTGCATACATATA
CCCCTAGTATAAGTATGCAT

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAVYKNEERGTYFCTFYYTDWTGKRKRKKKEGFKKKKEAADFEREFLNKQKNNCDMNFKELSDLYLEHSKTRIRVTTFQV
KEIIIKERILPYFKDMNVNNITPNNIRKWQNKLMSKDYKQTYLKAVNKQLNAIFNFAIKYYNLNSNPALKAGPMGKKDSE
GMQFWTLEEYKEFIKCVDNPMCKLAFEILFWTGLRKGELEALTFSDIDTKNKIISITKTYTRINKKDIINPPKTPKSKRK
VSISDFLCEDIENYKKKLYNFDKNERIFPVGRHILKNSMRDACEKSSVKEIRIHDLRHSHASLLIELGFSPLLIKERLGH
ENIQTTLDTYSHLYPNKGASIADKLDDLF

Sequences:

>Translated_349_residues
MAVYKNEERGTYFCTFYYTDWTGKRKRKKKEGFKKKKEAADFEREFLNKQKNNCDMNFKELSDLYLEHSKTRIRVTTFQV
KEIIIKERILPYFKDMNVNNITPNNIRKWQNKLMSKDYKQTYLKAVNKQLNAIFNFAIKYYNLNSNPALKAGPMGKKDSE
GMQFWTLEEYKEFIKCVDNPMCKLAFEILFWTGLRKGELEALTFSDIDTKNKIISITKTYTRINKKDIINPPKTPKSKRK
VSISDFLCEDIENYKKKLYNFDKNERIFPVGRHILKNSMRDACEKSSVKEIRIHDLRHSHASLLIELGFSPLLIKERLGH
ENIQTTLDTYSHLYPNKGASIADKLDDLF
>Mature_348_residues
AVYKNEERGTYFCTFYYTDWTGKRKRKKKEGFKKKKEAADFEREFLNKQKNNCDMNFKELSDLYLEHSKTRIRVTTFQVK
EIIIKERILPYFKDMNVNNITPNNIRKWQNKLMSKDYKQTYLKAVNKQLNAIFNFAIKYYNLNSNPALKAGPMGKKDSEG
MQFWTLEEYKEFIKCVDNPMCKLAFEILFWTGLRKGELEALTFSDIDTKNKIISITKTYTRINKKDIINPPKTPKSKRKV
SISDFLCEDIENYKKKLYNFDKNERIFPVGRHILKNSMRDACEKSSVKEIRIHDLRHSHASLLIELGFSPLLIKERLGHE
NIQTTLDTYSHLYPNKGASIADKLDDLF

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1786748, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41310; Mature: 41179

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYKNEERGTYFCTFYYTDWTGKRKRKKKEGFKKKKEAADFEREFLNKQKNNCDMNFKE
CCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSDLYLEHSKTRIRVTTFQVKEIIIKERILPYFKDMNVNNITPNNIRKWQNKLMSKDYKQ
HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH
TYLKAVNKQLNAIFNFAIKYYNLNSNPALKAGPMGKKDSEGMQFWTLEEYKEFIKCVDNP
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCH
MCKLAFEILFWTGLRKGELEALTFSDIDTKNKIISITKTYTRINKKDIINPPKTPKSKRK
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCHHHCCCCCCCCCCCCC
VSISDFLCEDIENYKKKLYNFDKNERIFPVGRHILKNSMRDACEKSSVKEIRIHDLRHSH
CCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASLLIELGFSPLLIKERLGHENIQTTLDTYSHLYPNKGASIADKLDDLF
HHEEHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AVYKNEERGTYFCTFYYTDWTGKRKRKKKEGFKKKKEAADFEREFLNKQKNNCDMNFKE
CCEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSDLYLEHSKTRIRVTTFQVKEIIIKERILPYFKDMNVNNITPNNIRKWQNKLMSKDYKQ
HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH
TYLKAVNKQLNAIFNFAIKYYNLNSNPALKAGPMGKKDSEGMQFWTLEEYKEFIKCVDNP
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCH
MCKLAFEILFWTGLRKGELEALTFSDIDTKNKIISITKTYTRINKKDIINPPKTPKSKRK
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCHHHCCCCCCCCCCCCC
VSISDFLCEDIENYKKKLYNFDKNERIFPVGRHILKNSMRDACEKSSVKEIRIHDLRHSH
CCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASLLIELGFSPLLIKERLGHENIQTTLDTYSHLYPNKGASIADKLDDLF
HHEEHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]