| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379401
Identifier: 148379401
GI number: 148379401
Start: 1548674
End: 1548979
Strand: Direct
Name: 148379401
Synonym: CBO1426
Alternate gene names: NA
Gene position: 1548674-1548979 (Clockwise)
Preceding gene: 148379400
Following gene: 148379402
Centisome position: 39.84
GC content: 29.41
Gene sequence:
>306_bases ATGGCAAAGATAATTGAAAACATGATTAAAAATAATATTAATATTAATGATGAAGTTATATCTGTAAATATGCTTTCTGC AGGAAAAGCTGCAGCTGATGCATATCTTAATGCCACATTAACAAGTAGTACTCCAGAATTAAGATCCATATACTCTGCTG GTTTAAATCAAATAGTTGGAGGTCATAGTGCTCTTACAGAATTAGTTGTAAATGAAGGTTGGGCTAAACCTTATGATTCA TCTAAACAACAATTAAGTGATACTTATAATGAATCAAAGACTGTAATTAATAAAATTGAGCAATAG
Upstream 100 bases:
>100_bases CAAGGTGAAGCTAGTGCATTAGCATCAGAGGGTAGAATAAAAGGATTGCAACAATTTATAAATGAAAATGAAATAATAAC TTCAAGGGAGGTACAATAAA
Downstream 100 bases:
>100_bases TATAAAGCAAAGTCTATTAAAAATATAAAAAATAGCCTTCCGGATATTAGTTTTATAACATTTGGAGCTAATTCAGATTG AATGGATTCTTTCTTTCAAT
Product: spore coat protein
Products: NA
Alternate protein names: Coat F Domain-Containing Protein; Coat F Domain Protein; Spore Coat Protein F Family Protein; Spore Coat Protein-Like Protein; Spore Coat Protein F
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MAKIIENMIKNNININDEVISVNMLSAGKAAADAYLNATLTSSTPELRSIYSAGLNQIVGGHSALTELVVNEGWAKPYDS SKQQLSDTYNESKTVINKIEQ
Sequences:
>Translated_101_residues MAKIIENMIKNNININDEVISVNMLSAGKAAADAYLNATLTSSTPELRSIYSAGLNQIVGGHSALTELVVNEGWAKPYDS SKQQLSDTYNESKTVINKIEQ >Mature_100_residues AKIIENMIKNNININDEVISVNMLSAGKAAADAYLNATLTSSTPELRSIYSAGLNQIVGGHSALTELVVNEGWAKPYDSS KQQLSDTYNESKTVINKIEQ
Specific function: Unknown
COG id: COG5577
COG function: function code M; Spore coat protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10959; Mature: 10828
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIIENMIKNNININDEVISVNMLSAGKAAADAYLNATLTSSTPELRSIYSAGLNQIVG CHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GHSALTELVVNEGWAKPYDSSKQQLSDTYNESKTVINKIEQ CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKIIENMIKNNININDEVISVNMLSAGKAAADAYLNATLTSSTPELRSIYSAGLNQIVG HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GHSALTELVVNEGWAKPYDSSKQQLSDTYNESKTVINKIEQ CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA