| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148378886
Identifier: 148378886
GI number: 148378886
Start: 999408
End: 1000016
Strand: Direct
Name: 148378886
Synonym: CBO0895
Alternate gene names: NA
Gene position: 999408-1000016 (Clockwise)
Preceding gene: 148378884
Following gene: 148378887
Centisome position: 25.71
GC content: 31.03
Gene sequence:
>609_bases TTGAAATCATTAGACAACTATCTTAAAGCACCATCACCGCAGGATTTAATTGAATTATCAAAGAATCAGCTTAATAAAGT AGATCAGGAAATTGAAAAATTAATACAAATTCGTTCCATTCTTAATAGGATTGTCCTTCAATCAGAGGAAGCTTTAAATG CCCCCCTAGATAAAGTTATAATTATGGATCTTGAAGAAGAACCTATCTTATATAGTGATAAAAATACTTTGAAAGGTGAT ACTACTAATGAAGAATGGTCTAGTTATTATGAAGAATTTTTTAAGAAAACAGAACTAAGGGGACCTGCATTTATTGGTTC TGTTATTGATAAAAATGATCTGCTTTCAGGTAAGTTTGGTAGAATCGATAGGTTATTTGTTCGTATGGATAAGCCAGAGG CTACTATGAAACCAGCAGGGTTATATGCAGTAACTTATTATAAGGGTTCTTATGAAGCAATAGTAGATTTTTATGAAGTA TTTATGAGAAAAATTAAGGAGCAAGGGCTTATCATATGTGGTGATGCCTATGAAGAATACTTACTTAATGTATTAGCGAC ACAAAATAGTATGGATTTTGTAACAAAAATTAGTGTTGCAGTAAAGTAA
Upstream 100 bases:
>100_bases TAAACCAGCAGGAATAAGTGATAATGGATACCGTTACTATACAATACCACAGTCTGATATTTTTTGGGTAATTCAGTCTT TAAGAGATCTTAATTTTCCT
Downstream 100 bases:
>100_bases CAAAAATAAATAGGAAGAAGGAAATTTTAATGTGGGTATTATTTGCATTTGCTTCAGCATTTTTTGCTGGGATTACAGCT ATTTTAGCTAAGATCGGAAT
Product: transcriptional regulator
Products: NA
Alternate protein names: Multidrug-Efflux Transporter 2 Regulator; Transcriptional Regulator; MerR-Family Transcriptional Regulator; Transcriptional Activator; Merr Family Transcriptional Regulator; Multidrug-Efflux Transporter Transcription Regulator BltR
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIVLQSEEALNAPLDKVIIMDLEEEPILYSDKNTLKGD TTNEEWSSYYEEFFKKTELRGPAFIGSVIDKNDLLSGKFGRIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEV FMRKIKEQGLIICGDAYEEYLLNVLATQNSMDFVTKISVAVK
Sequences:
>Translated_202_residues MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIVLQSEEALNAPLDKVIIMDLEEEPILYSDKNTLKGD TTNEEWSSYYEEFFKKTELRGPAFIGSVIDKNDLLSGKFGRIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEV FMRKIKEQGLIICGDAYEEYLLNVLATQNSMDFVTKISVAVK >Mature_202_residues MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIVLQSEEALNAPLDKVIIMDLEEEPILYSDKNTLKGD TTNEEWSSYYEEFFKKTELRGPAFIGSVIDKNDLLSGKFGRIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEV FMRKIKEQGLIICGDAYEEYLLNVLATQNSMDFVTKISVAVK
Specific function: Unknown
COG id: COG4978
COG function: function code KT; Transcriptional regulator, effector-binding domain/component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23217; Mature: 23217
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIVLQSEEALNAPLDKVI CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHEE IMDLEEEPILYSDKNTLKGDTTNEEWSSYYEEFFKKTELRGPAFIGSVIDKNDLLSGKFG EEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC RIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEVFMRKIKEQGLIICGDAYEEY CHHEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHH LLNVLATQNSMDFVTKISVAVK HHHHHHCCCCHHHHHHHHEECC >Mature Secondary Structure MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIVLQSEEALNAPLDKVI CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHEE IMDLEEEPILYSDKNTLKGDTTNEEWSSYYEEFFKKTELRGPAFIGSVIDKNDLLSGKFG EEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC RIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEVFMRKIKEQGLIICGDAYEEY CHHEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHH LLNVLATQNSMDFVTKISVAVK HHHHHHCCCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA