| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148378831
Identifier: 148378831
GI number: 148378831
Start: 947877
End: 948005
Strand: Direct
Name: 148378831
Synonym: CBO0839
Alternate gene names: NA
Gene position: 947877-948005 (Clockwise)
Preceding gene: 148378829
Following gene: 148378832
Centisome position: 24.39
GC content: 31.01
Gene sequence:
>129_bases ATGAGTTATGCTACTGTAATAGTATGCCCTCAAGTCAATATGTTTATTGTCTTGCTTTTAATGTGTATAGTTCATAATAT GAACTGCGACGTAAGTATTAAAAGTGAATATACGAACGATATTCCTTGA
Upstream 100 bases:
>100_bases TAATCTTTTTCAATTCGACACCTCCATTTCTTAATTTGCATGGTAAACAGCATTAATATTATAATGGTAATTCACAAAAA AGTATAGATTTTTCTTTTCA
Downstream 100 bases:
>100_bases AAATCGAATAATAAGGTATTTAAAAGTCGGTTCAATCATTCACAAATTATTGCTCCAGTAAATAATCTATTAATATAGCG ATTTAATTGTTGGAGGTTAT
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MSYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP
Sequences:
>Translated_42_residues MSYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP >Mature_41_residues SYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4764; Mature: 4633
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 9.5 %Met (Translated Protein) 16.7 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 14.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure SYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA