| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148378386
Identifier: 148378386
GI number: 148378386
Start: 452865
End: 454376
Strand: Direct
Name: 148378386
Synonym: CBO0383
Alternate gene names: NA
Gene position: 452865-454376 (Clockwise)
Preceding gene: 148378383
Following gene: 148378387
Centisome position: 11.65
GC content: 27.31
Gene sequence:
>1512_bases ATGAAAAAAGCAAGACAAATTTTATATTTAATTATACTTATATTTTCCCTAAATGTTAGTAACGTTTTAGCAGCGGATAA TATAAAAAAATATCCAGCACCGGATGTGGAAAAGCGTTCCTATTCCACAACGGTAACATATAATAAGTATCTCTATGATA ATATCTTAAATGGACTTATAAACTTAAAAGATAAGGTAGATACATCTGCTTATTCTAAAAATGCGGATGAGGTTTTTAAG GTTTTAGAAAAAGTTTTAGATGATCATCCAGAAATATTTTATTTTGATTATGAAAACTGTTCCTTTTGGAGCAATGGAAT ATTAGAATTAGGATATAGAGGGAATAAAGAAACAATAAATACTATGAGACAACAATTGGATACTAAGGTACAATCCATAA TAAATAATGTGATAACTAAAGATATGTCTGAACTTGAAAAGGAAATGGCTATTCATGATTATATAGTTTTAAATACTAAA TATGATGAAGAGGCTTTAAATGGAAATATTAGTTCAGAGTTAATTTTTACTTCTTATGGATGTCTTGTAAATAACTTTGC TGTATGTGATGGATATGCCAAGGCTATGCAACTTCTATTAAATAAAGTAGGGGTTTATACTATAAGGGTAACTGGAGATG GTAATGGTGTTAGCCATGCTTGGAATATAGTAAGAATAAATGGTAAAAACTATCAAGTAGATGCTACTTGGAATGATCCA GTGCCAGATAGTGGTTATGTTCGTTATAAATATTTTAATATGTCAGATGCAGATATTGCAAAGGATCATCACTGGGTAAA ATCTGATTTCCCTGCTTGCAATGACAATTCTTTTAAATATTTACACAAAGCGGATTATGTAGTTAAAGATTTAGATTATA TTTATTATAGTAACAATGAAGATGATTATAATCTTTATAAAATGAAGATAGATGGAAGTAATAATCAAATGCTTACAGAG GATAGAGCTGTAAATTTAGTTTACTACAATGATTATATATATTTTAGTAATTATTCAGATGGAGGAACTTTATATAAAGT AAAGAATGATGGTACAGAATTAGAACAAATTTTGGACAACCATGTAGAAAATCTACATTATTCAAATGGGTACTTAACCT ATCATAATGAGGATCTTTCTAAAGATGAAAGAATGAAATTAGAACAAATAGTCTATGAAGTAGAAAATAAAGAAAAGTTT AATGAAATTTTTTCTTCCTATAAAGACTGGGGACAAGCAAAAGAAGTTCCACGCAATAAGATTTGGAAGATTAGTTTTAA TAGAGCTGTAAATTCAGAGAATTTGAAAGACCAAGTTTATGTAATGGATAGTTCTTTTAATAAAGTAACAGATATAGATG TAAATATTAATGAAGGTAAAAATATAATAATAACTAAAAAAGCTTCATATAAAAGAGGTGGATTATATTATTTAGTTATA AGTAAACCTATTAAGGATACTAAAGGACAGGAAATAAAAGAACCAGTTGTAATGAGATTTAAAATATATTAA
Upstream 100 bases:
>100_bases AAATAAAATATATTTTATTTAAATCTAATAAAAATTAAATAAAAGATTAATGTATAAAATCTAAAATTTAGGTTTTATAT ATTTAAGTGAGGGTAGATTT
Downstream 100 bases:
>100_bases ATTTAAAATATTAATATTTAAATAAAATAATATAGATATAGGATTTATAGTTTATAAGACTATTTATTCTATATCTTTTT TATTTAATATTTATATTAGT
Product: exported protein
Products: NA
Alternate protein names: Transglutaminase/Protease; S-Layer Protein; Transglutaminase Domain Protein; Transglutaminase-Like Superfamily Protein; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Protease; Lipoprotein; S-Layer Domain Protein; S-Layer-Like Domain-Containing Protein; Transglutaminase-Like Protease; Bacterial Ig-Like Domain; Copper Amine Oxidase Domain Protein; Murein Endopeptidase; Protein Involved In Cytokinesis Contains TGc Domain; Ig Domain-Containing Protein; Exported Protein
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDTKGQEIKEPVVMRFKIY
Sequences:
>Translated_503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDTKGQEIKEPVVMRFKIY >Mature_503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEKF NEIFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI SKPIKDTKGQEIKEPVVMRFKIY
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58521; Mature: 58521
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLI CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN CCCHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCCHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEKFNEIFSSYKDWGQAKEVPRNK HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE SKPIKDTKGQEIKEPVVMRFKIY ECCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLI CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN CCCHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCCHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEKFNEIFSSYKDWGQAKEVPRNK HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINEGKNIIITKKASYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE SKPIKDTKGQEIKEPVVMRFKIY ECCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA