| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148378378
Identifier: 148378378
GI number: 148378378
Start: 435663
End: 436199
Strand: Reverse
Name: 148378378
Synonym: CBO0375
Alternate gene names: NA
Gene position: 436199-435663 (Counterclockwise)
Preceding gene: 148378379
Following gene: 148378365
Centisome position: 11.22
GC content: 27.37
Gene sequence:
>537_bases ATGAAAAATAAAAATTATAATACTAGAAAAATGATTTTTTTAAGTTTGATGGTAGGTATAGCATTAATTATATACATAAT AGAGGCTCAAATACCTGTACTTTTTCCTGGTATTAAACTAGGTCTTGCTAATGTTATTTCACTAGTTACCTTAATTATGT TAGGTGGCTATGAAGCCCTATTGGTTATGTTTCTAAGAACCCTTTTAGGATCTATGTTTGCAGGAAATATGTCTTCTTTT ATGTTTAGCTTGGCTGGTGGTTTTTTAAGTAACATTATTATGATTATACTTTATTATAAATTTAAAGAAAACTTAAGTTT AAGTTCCATAAGTATTTGCGGTGCTATCTTTCACAATATAGGTCAGCTCTTTATAGCTGCCTTTGTAGTAAAAGATTTTA GAATATATGTGTATTTACCGGTACTTATGATTTCCGGTATAATAACAGGTTATTTTATAGGTCTATGCACTAAATATCTT AATAAAAATTTGGGCAATGTAAAACTATTTAATGAACTAAAGAACAATGAAAAATGA
Upstream 100 bases:
>100_bases GTGAAACGGCTGCTTGTCTTCCTCATAAAATTATAATTACTATTGAAAAAAATGATAAAGAAGTAGACGAAGTTTCTTAT TAAATTTAGGAGTAATCTAT
Downstream 100 bases:
>100_bases TCAATTGTCAATGCTCAATGATCGGTGCTCAATTGTTAATTAATAATTTTTAATTGAGCATTGGGCATTACTAATTGATT ATTGATCATTAAATAAAAGA
Product: hypothetical protein
Products: diphosphate; all-trans-heptaprenyl diphosphate
Alternate protein names: Heptaprenyl Diphosphate Synthase Component I Family Protein; Trans-Hexaprenyltranstransferase; Heptaprenyl Diphosphate Synthase Protein; Integral Membrane Protein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL NKNLGNVKLFNELKNNEK
Sequences:
>Translated_178_residues MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL NKNLGNVKLFNELKNNEK >Mature_178_residues MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL NKNLGNVKLFNELKNNEK
Specific function: Unknown
COG id: COG4769
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.30
Molecular weight: Translated: 19924; Mature: 19924
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHH LVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKNLGNVKLFNELKNNEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC >Mature Secondary Structure MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHH LVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKNLGNVKLFNELKNNEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: all-trans-hexaprenyl diphosphate; isopentenyl diphosphate
Specific reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA