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The map label for this gene is yxdK [H]

Identifier: 148378321

GI number: 148378321

Start: 373188

End: 374168

Strand: Direct

Name: yxdK [H]

Synonym: CBO0319

Alternate gene names: 148378321

Gene position: 373188-374168 (Clockwise)

Preceding gene: 148378320

Following gene: 148378322

Centisome position: 9.6

GC content: 25.99

Gene sequence:

>981_bases
ATGAAGTTATTTATAAAAGACAATAAAGGATATATAGTTGTATATTTTATAAGTATTTTTATTACATTGGGATACTTAGC
TCTTTCAGGATTTGTACAAATTGGTGAGTACTTATATATAGTATTATTTAATACATTTATTTTAGGATGCTTTTTATTTT
TTAGATATTATAAGAATAAAGAAGTATATAGATTTTTAGATGAAGGTCTAAACAATTTAGATGAATCTTTTTTAGATTTA
GGGAATTCAGTTTTAGGGGAAAGTATCTCTAATATCTTAAAGAAAGAGCATAATTTATATGAAGCTGAAATTATAAAACA
CAATAAGGTTTATAATGATCATCTAACATTTATAAATCAATGGGTTCATCAGATGAAAACACCTCTATCAGTAATTCAAC
TACAAATGCAAGAATACGAGGGAGAAGAACCTTTTGATAGTATGAAGGTGGAGATAAGTAAATTAAATAGAGGATTAAAT
ATGGCTATGTATTTTGCTAGACTTGATTCTTTTCAAAAAGATTTCATAGTAGAAAAATTTTCTTTATATAATTTAGTTAT
GAGTAAAGTTAATGAAGAAAAGCAGATATTTATTAAAAATAGGATATTACCAAAAGTTGAAATAGATGATTCTATAGAAG
TATACAGCGATGTTAAATGGATGAAATTTGTATTAGAACAGCTCATTGTTAATGGAGTAAAATATTCCAAAGATAAGGGG
AAAGAATTAATTATAAGAGCTTATGATGAGGAAAATGCTGTTAAGTTAAGTGTAATTGATAAAGGTGTAGGAATACCAAA
AAAAGATATTAAAAGAGTTTTTGATCCATTTTTTACAGGGGAAAATGGACGTAATTTTGGAGAATCTACTGGAATGGGAT
TATATATAGTTAAAAGGATCTGTGACAGTTTAGAGCATAATGTATTTATAGAGTCTAAAGTTTCGGAGGGAACAACTGTT
TCTATAATATTTGAAAAGTAG

Upstream 100 bases:

>100_bases
AATAAGAAAAAGACTTCATAAGTTAGGAATAGAAGATGGAATAGAAACCGTAAGAGGTGTGGGATATAGATTGAATAAAA
CTTGGTAGGGAGCAGAAAAA

Downstream 100 bases:

>100_bases
GATACTATATTAAATATATAAATAGGATAGATAGTTTAAAACTATACTATTCTATTTTTTTATTAATTAATAAGTATGAC
ATACATGTCATATTCATGTA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNTFILGCFLFFRYYKNKEVYRFLDEGLNNLDESFLDL
GNSVLGESISNILKKEHNLYEAEIIKHNKVYNDHLTFINQWVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLN
MAMYFARLDSFQKDFIVEKFSLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMKFVLEQLIVNGVKYSKDKG
KELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGENGRNFGESTGMGLYIVKRICDSLEHNVFIESKVSEGTTV
SIIFEK

Sequences:

>Translated_326_residues
MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNTFILGCFLFFRYYKNKEVYRFLDEGLNNLDESFLDL
GNSVLGESISNILKKEHNLYEAEIIKHNKVYNDHLTFINQWVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLN
MAMYFARLDSFQKDFIVEKFSLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMKFVLEQLIVNGVKYSKDKG
KELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGENGRNFGESTGMGLYIVKRICDSLEHNVFIESKVSEGTTV
SIIFEK
>Mature_326_residues
MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNTFILGCFLFFRYYKNKEVYRFLDEGLNNLDESFLDL
GNSVLGESISNILKKEHNLYEAEIIKHNKVYNDHLTFINQWVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLN
MAMYFARLDSFQKDFIVEKFSLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMKFVLEQLIVNGVKYSKDKG
KELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGENGRNFGESTGMGLYIVKRICDSLEHNVFIESKVSEGTTV
SIIFEK

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=210, Percent_Identity=24.2857142857143, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38042; Mature: 38042

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNTFILGCFLFFRYYKNK
CEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EVYRFLDEGLNNLDESFLDLGNSVLGESISNILKKEHNLYEAEIIKHNKVYNDHLTFINQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHH
WVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLNMAMYFARLDSFQKDFIVEKF
HHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMKFVLEQLIVNGVKYSKDKG
HHHHHHHHHCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGENGRNFGESTGMGLYIVKRI
CEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
CDSLEHNVFIESKVSEGTTVSIIFEK
HHHHHCCEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNTFILGCFLFFRYYKNK
CEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EVYRFLDEGLNNLDESFLDLGNSVLGESISNILKKEHNLYEAEIIKHNKVYNDHLTFINQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHH
WVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLNMAMYFARLDSFQKDFIVEKF
HHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMKFVLEQLIVNGVKYSKDKG
HHHHHHHHHCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGENGRNFGESTGMGLYIVKRI
CEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
CDSLEHNVFIESKVSEGTTVSIIFEK
HHHHHCCEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]