| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is gpmI [H]
Identifier: 148378232
GI number: 148378232
Start: 270578
End: 272107
Strand: Direct
Name: gpmI [H]
Synonym: CBO0229
Alternate gene names: 148378232
Gene position: 270578-272107 (Clockwise)
Preceding gene: 148378231
Following gene: 148378233
Centisome position: 6.96
GC content: 31.44
Gene sequence:
>1530_bases ATGAGTAAAAAGCCAGTAGTTTTAATGATACTAGATGGATTTGGATTAACAAATAAGGTAGATGGCAATGCAGTATCAGC AGCCAATAAGCCTAATTTAGATAATATATTAAAAAAATATCCTCATACTCAATTAGGTGCCAGTGGAATGGATGTAGGCC TTCCAGAAGGTCAAATGGGTAATTCAGAAGTAGGACATTTAAATATAGGTGCAGGAAGAATAGTATATCAAGCCCTTACA AAAATAACAAAATCTATTTCTGATGGAGATTTTTTTGAAAATGTAGCTTTAAATAAAGCTATAAAAAATGTAAAGAAAAA TAATTCTACCCTACATCTTTTAGGTCTTTTATCACCAGGTGGAGTACATTCTCATATAGACCATTTAAAAGGTTTAATAA AATTAGCAAAAGAAAAGGATATTAAAAAAGTTTATATTCATGCATTTTTAGATGGAAGAGATGTAGCCCCATCATCAGCT AAAGAATATATAGAAGATATAGAAAACTATATGAATGAAATTGGTGTAGGTGAAATAGCTACAATATCAGGAAGATATTA TGCTATGGACAGAGATAAAAGATGGGAAAGGGTACAGCTTTGTTATAATGCCATTGTACTAGGAAAAGGTGAAGAAGCTA ATTCAGCAGTAGAAGGTTTAGAAAAATCTTATAGAGATAATAAAACTGATGAATTTGTTTTACCATCAGTAGTATTAAAA GAAGGAAAACCTAAGGCAAAAATAGAAAATAAAGATTCAGTAGTATTCTTTAACTTTAGACCAGATAGAGCTAGAGAACT TACAAGAGCTATAAATGATAAAGTATTTGATGGTTTTGAAAGAGAAACTTTAGATTTAACTTATGTTACTATGACAGAAT ATGATAGTACTTTAGAAAATGTAGAGGTAGCTTTTCCTCCAGAGCATTTAAATAATACTTTAGGAGAATATGTAAGCAAA AATGGTAAAAAACAATTAAGAATAGCTGAAACAGAAAAATATGCTCATGTTACTTTCTTCTTTAATGGTGGAGTAGAAGA GCCTAATGAAGGAGAAGATAGAGTTTTAATTCCATCACCAAAGGTAGCAACTTACGATATGCAACCAGAAATGAATGCAT ATGAAGTTACAGATAAGCTTTTAGAAAGACTAGATGAAGATAAATACGATATGGTAATATTAAACTTTGCAAATCCAGAT ATGGTAGGCCATACAGGAGTATTTGAAGCAGCAAAAAAAGCTATAGAAACTGTGGATGAATGTGTAGGTAAAATAGTTAA TAAAGTTTTAGAAAAGGATGGAACAGCATTTATTACAGCTGATCATGGAAATTCAGAAGAAATGATAGACTATTCTACAG GAAAGCCTATGACTGCCCATACAACAAACCCAGTACCATTTATGTATGTGTCTAAGAATAGTAAAGAGCTAAGAGAGGGT GGCAAACTAGCAGACATAGCACCAACAATGTTACAACTCATGAACCTTCCTAAACCCTCTGAAATGACAGGGAATAGTCT TATTAAATAA
Upstream 100 bases:
>100_bases AATTATTAAAAGTGACAAGTGACAAGCTATAAGTTACAAATTGTTTTATATTAGCACTTCTCATTTGTATATTTTTATTT AATGAGATTTGGAGGTAGAA
Downstream 100 bases:
>100_bases TAGGGAAACTATATTTAAGATAAAATAATTTTTTTAAAAATAAGGAGGACCCAACATGAAAAATTATATTGAAATAGTAG ATGTATACGCAAGACAAATC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALT KITKSISDGDFFENVALNKAIKNVKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSA KEYIEDIENYMNEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSK NGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPD MVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSKNSKELREG GKLADIAPTMLQLMNLPKPSEMTGNSLIK
Sequences:
>Translated_509_residues MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALT KITKSISDGDFFENVALNKAIKNVKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSA KEYIEDIENYMNEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSK NGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPD MVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSKNSKELREG GKLADIAPTMLQLMNLPKPSEMTGNSLIK >Mature_508_residues SKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALTK ITKSISDGDFFENVALNKAIKNVKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAK EYIEDIENYMNEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLKE GKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSKN GKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDM VGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSKNSKELREGG KLADIAPTMLQLMNLPKPSEMTGNSLIK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=510, Percent_Identity=51.9607843137255, Blast_Score=551, Evalue=1e-158, Organism=Caenorhabditis elegans, GI32564249, Length=513, Percent_Identity=43.4697855750487, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=43.4697855750487, Blast_Score=429, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56552; Mature: 56421
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMG CCCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIKNVKKNNSTLHLLGLLSPG CCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMNEIGVGEIA CHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEE TISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK EECCEEEEECCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHH EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLEN CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHC VEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSP CEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC KVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDMVGHTGVFEAAKKAIETVDE CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH CVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSKNSKELREG HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCCEEEEECCCHHHHHCC GKLADIAPTMLQLMNLPKPSEMTGNSLIK CCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMG CCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIKNVKKNNSTLHLLGLLSPG CCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMNEIGVGEIA CHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEE TISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK EECCEEEEECCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHH EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLEN CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHC VEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSP CEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC KVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDMVGHTGVFEAAKKAIETVDE CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH CVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSKNSKELREG HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCCEEEEECCCHHHHHCC GKLADIAPTMLQLMNLPKPSEMTGNSLIK CCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA