| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yhgH [C]
Identifier: 148378175
GI number: 148378175
Start: 205451
End: 206074
Strand: Direct
Name: yhgH [C]
Synonym: CBO0171
Alternate gene names: 148378175
Gene position: 205451-206074 (Clockwise)
Preceding gene: 148378174
Following gene: 148378176
Centisome position: 5.29
GC content: 24.04
Gene sequence:
>624_bases GTGATATATCCCTATGAAAATAAATGTGTAATATGTGAAAAATATATAGAAGAAGATTTAATATGCAAAGAATGCTTTAG TTCTATAAAAAGGTGCAGTGATGTTAAAATTATTGAAAAGGGAAAAGATTGCTTTCCAGCGTTTCCTACTTGTTATTATT CAGGTATAATGATGGAACTTATATTAAATTTAAAATATAAAGGTGATTTTAAAAGTGGAGAAGTAATAGCAAATTTAATG TGTAAAAAAGTAAAAGAAGTTAATATAAATACAGATATTATAACTTTTGTTCCATCCAGTAAAAAATCTTATAAAAAAAG AGGATATAATCAAAGTGAATACTTAGCTAAAATTATAAGTAAAAACATTAATGTACCTATAGCACATTGTTTAAAAAAAT ATATGAATACAAAAGATCAAATAGGATTAAATGGACTTGAAAGATGGTTAAACGTTGAGAATAGTTTTAAAGTTTATAAT GAAAAATGTATAAAAAATAAAAAAGTACTTTTAATTGATGATGTTTTAACCACAGGAGCGACTTCCTTTTATTGTGCTAA TGAGTTAAAAAAAAGAGGTGCAAAAGAAATTTTTATATTGACTGCAGCAAAAAGTGATGTATAA
Upstream 100 bases:
>100_bases ATATGGAAAAAGCTAAAAATATAATAAGAAGCTTTAATAAAGAAGCATGGGAACTGGGATTTTTAACTATATAAAATATA TTATAGAATGCATAGGAGAA
Downstream 100 bases:
>100_bases TTTAAATATAGTAAAATTAGGTTTGTGGTTGAAAGTCGATGCCAGTCGCAGGCAAAACGATCCACGTAAGTTAAATAAAA ATATTTGATGAGCATGGTGC
Product: phosphoribosyl transferase
Products: NA
Alternate protein names: Competence Protein F; Competence Protein ComF; Amidophosphoribosyltransferase; Competence Protein; ComF Family Protein; Amidophosphoribosyltransferase-Like Protein; Amidophosphoribosyl-Transferase; ComFC Protein; ComF Protein; Phosphoribosyl Transferase; DNA Transformation Protein; Phosphoribosyl Transferase Domain Protein; Amidophosphoribosyltransferases; Competence Protein F-Related Protein; Phosphoribosyltransferases Family Protein; Amidophosphoribosyltransferase Family Protein; Competence Protein -Like Protein; Midophosphoribosyltransferase ComFC B.Suntilis Ortholog; Competence-Related Protein ComF; Phosphoribosyltransferace; ComFC Transformation Protein; Competence Protein FC; Amidophosphoribosyltransferase ComFC
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCFPAFPTCYYSGIMMELILNLKYKGDFKSGEVIANLM CKKVKEVNINTDIITFVPSSKKSYKKRGYNQSEYLAKIISKNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYN EKCIKNKKVLLIDDVLTTGATSFYCANELKKRGAKEIFILTAAKSDV
Sequences:
>Translated_207_residues MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCFPAFPTCYYSGIMMELILNLKYKGDFKSGEVIANLM CKKVKEVNINTDIITFVPSSKKSYKKRGYNQSEYLAKIISKNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYN EKCIKNKKVLLIDDVLTTGATSFYCANELKKRGAKEIFILTAAKSDV >Mature_207_residues MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCFPAFPTCYYSGIMMELILNLKYKGDFKSGEVIANLM CKKVKEVNINTDIITFVPSSKKSYKKRGYNQSEYLAKIISKNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYN EKCIKNKKVLLIDDVLTTGATSFYCANELKKRGAKEIFILTAAKSDV
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23762; Mature: 23762
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCFPAFPTCYYSGIMMEL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHH ILNLKYKGDFKSGEVIANLMCKKVKEVNINTDIITFVPSSKKSYKKRGYNQSEYLAKIIS HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH KNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYNEKCIKNKKVLLIDDVLTTGA CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHCC TSFYCANELKKRGAKEIFILTAAKSDV CHHHHHHHHHHCCCCEEEEEEECCCCC >Mature Secondary Structure MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCFPAFPTCYYSGIMMEL CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHH ILNLKYKGDFKSGEVIANLMCKKVKEVNINTDIITFVPSSKKSYKKRGYNQSEYLAKIIS HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH KNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYNEKCIKNKKVLLIDDVLTTGA CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHCC TSFYCANELKKRGAKEIFILTAAKSDV CHHHHHHHHHHCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA