Click here to switch to the map view.

The map label for this gene is 148378021

Identifier: 148378021

GI number: 148378021

Start: 15517

End: 16581

Strand: Direct

Name: 148378021

Synonym: CBO0010

Alternate gene names: NA

Gene position: 15517-16581 (Clockwise)

Preceding gene: 148378020

Following gene: 148378022

Centisome position: 0.4

GC content: 29.77

Gene sequence:

>1065_bases
TTGAATAAACTTATACCTTATAATAGTAAAGTTCTTTTAAAACCTAACATGCTTAGTATTGAAAATGAAGGTTCTCCTGT
GGTAACTAATAGTGTAGTTTTTGAAGCAGTAATAAGAATATTAAGAGATTATTCTAATAACATATCCTTTGGAGATTCTC
CTGGATTTGGAGATTCTAAAAAGGCAGCTGAAAAATCTGGATTACTTAATATAGCAAAGAAATATAATATAGAATTTAAA
GATTTTAAAGAATCTATTAATGTAAGTTGTGATAATTCTATTTTATGCAGATCCTGGACTGTAGCGAAGGCAGCTTATGA
AACAGATGTACTAATAACATTACCTAAATTAAAGACACATGCTATGGCTTATTTTACAGGTGCAGTTAAGAATCAGTTTG
GATGTATACCAGGAACTTTAAAAGCTACTTGGCATACAAGAATGCCTAATGCAAATAATTTCTGTAAAATGTTATTAGAT
CTAAATACATTGTTAGAAACTGATTTTGCTATACTAGATGGCATTATAGCTATGGAAGGAAATGGTCCTAAAAATGGAAC
TCCCTATAATCTTAATACAATTATAATGGGGGATAGCCTTACAGCGGTAGATTCCGTTGCTGTTAAAATAATAGGATATG
ACAATCCATTAGATATACCTGTATTAAAAGAAGCTTATGATAGCAATTGGGGAAGTGTTTTTTTAAAGGACATAGATATA
TTAGGTGAAAAAATAGATAGCATGGTCGTAGATAATTTTAAACTTTGTAGAGAGGGTGGGGATTTTTATTTTATAAATCC
TAAAGTTACAAATTTTTTAAAGGATATTATTGCACCAGATCCTACTTTAATAAAAGAAAAGTGTATAGGATGCAATAGAT
GTGCTGAAGTATGCCCTGAAAAACCATATGTTATAGATATGATAAAAAAAGGGGGTAAAAAAATACCAGTTTGGAATATG
AAAAAATGTATAAGATGTTTTTGTTGTCAGGAACTTTGTCCCAAAGGAGCTATAGAAACTAAATATTCTTTTATTGGAAG
ATTTTTAAATAGAGATGGCAGGTGA

Upstream 100 bases:

>100_bases
AATGGATAAAGTAGCCCTTTTAAAATGTGATGAATATGATTTAGAAAAGGTAGAGAAAACTATAAGAAATGGATTTGAAC
TTTTAGGAGGAAACTCTTTT

Downstream 100 bases:

>100_bases
TAAAATGAAAAATAAAAAAGCTTTGTTTATACCATTATTCATAATAATTTTATTTATAGCATTTTTTAATAAAATAATAA
ATTTTATTATTAATATAAAA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFK
DFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLD
LNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDI
LGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPEKPYVIDMIKKGGKKIPVWNM
KKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR

Sequences:

>Translated_354_residues
MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFK
DFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLD
LNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDI
LGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPEKPYVIDMIKKGGKKIPVWNM
KKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
>Mature_354_residues
MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFK
DFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLD
LNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDI
LGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPEKPYVIDMIKKGGKKIPVWNM
KKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007160 [H]

Pfam domain/function: PF04015 DUF362 [H]

EC number: NA

Molecular weight: Translated: 39441; Mature: 39441

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNNISFGDSPGFGDSK
CCCCCCCCCEEEECCCEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTH
HHHHHHCHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCEEEECCCHHHH
AMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEG
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
NGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDI
CCCCCCCCEEEEEEEECCCCHHHHHEEEEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHH
LGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPE
HHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
KPYVIDMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
CCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNNISFGDSPGFGDSK
CCCCCCCCCEEEECCCEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTH
HHHHHHCHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCEEEECCCHHHH
AMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEG
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
NGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDI
CCCCCCCCEEEEEEEECCCCHHHHHEEEEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHH
LGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIKEKCIGCNRCAEVCPE
HHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
KPYVIDMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
CCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]