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The map label for this gene is yraM [C]

Identifier: 148361335

GI number: 148361335

Start: 3561090

End: 3562901

Strand: Reverse

Name: yraM [C]

Synonym: LPC_3310

Alternate gene names: 148361335

Gene position: 3562901-3561090 (Counterclockwise)

Preceding gene: 148361338

Following gene: 148361334

Centisome position: 99.62

GC content: 40.51

Gene sequence:

>1812_bases
ATGTTAATTAAACAATTAAAACTTCGCATGTTCTTAGTATTGGTATCTCTTTTTTTGCTTTGCCAATGCACAAAAACAGT
CAACTCAACCGAGCCTGTAGTAACAGTTAATAAAAAATTAAAAACCCCATATTCATTACCTACTGCAGCATATTTGGCTA
TGGCTAAGAGTCAACAAGGCTATGAAAAGCAAAGCGCATTGATTTCCGCAGCTGGCCGTTTAATTACTGATGGGCAATGG
AAGCAAGGAACTGCCATTTTAGCACAAACTGGAGAATTAACAGTTGAGCAGGCTGATGAAAAGAATCTTTTACTGGCAAA
AGTCGACTTTATGCGCGATAGACCCAGAGATGCCTTAGCCAAGTTAGCTAGAATTAAAGAACCTGAAAGACTCTCATTAT
ATAATCAAATCCAATTTCACGAACAATTGGCGAAGTCATTTCGGTCCATTGGTAGTTACTCTGAATCAGTTAGTGAGCGT
ATCAAGTTAGAATCATTGCTCCCTGATGAGGAAAGTCAGGTCAATAATCGGCGGGCTTTGTGGTTGACCTTAACCAGTTT
ACCTCAAGAGGAGCTGAATACGATGGCTCTGGAGGCTGTGAACAAATCAGAAATGCAAGGCTGGTTGCAGCTGGCTGTGA
TTTCCCGCAAGTATAGAAATAACTCAAAGTCGTTATTGGCTGCCTTGGATCAATGGCAGATGCATTTTAGTAATCATCCA
GCAAATCAGATTTTGCCTAATCCCTTAGACAGCATATCAGATAAATTATTAGCCCCACCTAAACAGGTCGCTTTGTTATT
GCCTTTAAGTGGTCCATTATCCGGGCCGGGTAATGCTATACGGGAAGGCTTTATGGCAGCCTATAAGGCCAACAGGGGAG
ATGAATCAACAAAAATTAAAGTTTATGATACAAGCAAAGGCGATATAACGAACACCTATCGCCAAGCTATTTCTGATGGT
GCTGAATATGTTGTTGGCCCTTTAACGAAAACTCAAGTCGCTACCATTGCATCAATGGAGCATCCGGTTCCTACCCTATT
GCTAAACGATACGGATGCCAGCACACAAAATAACTCTTATTCCTTAGGCTTATCCCCTGTTAATGAAGCGATTCAGGTTG
CAATAAAAGCAAGAAGCAAAGGATATAAAAAAGCGCTGATTATTGCTCCCAATAATGCCTGGGGTAATGAAGTAACGAAA
GCTTTTATCAATCAGTGGAATGAAGATGGGGGCCATATTGTTGACTCTCTTCGCTACGAAGCCAAACAAGATTTGAATAA
GAGCATGAAAGATTTTTTACAAATCACCAATAGCCAGGAACGCGAGAAAAAACTAAAGCAGGTATTAGGCTATAATTTCC
AATCAACTACGAGCCGAAGACAGGATTTTGATATGATATTTTTATTGGCTTATCCTTCCAAGGCCCGCCAAATTATGCCT
TTATTAAAATATTATTATGCCGGAGATGTTCCTGTGTACGCTACTTCAAGTGTTTATGGCGGTAGCGCCAATGCTTTGAA
GGATAAGGATTTGGATGGGATCATTTTCTGCGATATGCCTTGGGTATTTTCTCATCAGATGGGAACGAAAAACTGGCCTG
AACAATTCAATAGCTATAACAGGCTTTATGCTTTAGGTGTGGACAGTTATACCTTGGCTACCCAATTAAACCAACTGATA
TTATTTCCAGCCGATGGCTCTAGCGATTCAACGGGTATTTTATATTTAAAGCCGACTCAACAAGTAGCCAGGGTTCTTGA
ATGGGGGCAATTTAAACAGGGTTTAGCCCATTCACTAGGGGATACTGTTTAG

Upstream 100 bases:

>100_bases
TTCCTATTGGGGTAGCAACTATATAGAGAGTTCCTAAACCTGTTGCTAGAGTGTTTGTCATAGTTTATCCTCTTGCGAAA
AGCAAATTTGGCGAATTAAC

Downstream 100 bases:

>100_bases
TTTTGAAGTGAGCAAGAATAATGACCCAAGAAAAAGGAAAGTTTGCTGAACAATTGGCTTTAAATTACTTAAAGGAAAAT
GGTCTTGCATTAGTAATGCA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKTPYSLPTAAYLAMAKSQQGYEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQADEKNLLLAKVDFMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEESQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISDKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKGDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDASTQNNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDVPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSSDSTGILYLKPTQQVARVLEWGQFKQGLAHSLGDTV

Sequences:

>Translated_603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKTPYSLPTAAYLAMAKSQQGYEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQADEKNLLLAKVDFMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEESQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISDKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKGDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDASTQNNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDVPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSSDSTGILYLKPTQQVARVLEWGQFKQGLAHSLGDTV
>Mature_603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKTPYSLPTAAYLAMAKSQQGYEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQADEKNLLLAKVDFMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEESQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISDKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKGDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDASTQNNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDVPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSSDSTGILYLKPTQQVARVLEWGQFKQGLAHSLGDTV

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=323, Percent_Identity=26.0061919504644, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 67344; Mature: 67344

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKTPYSLPTAAYLAMAKSQQG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC
YEKQSALISAAGRLITDGQWKQGTAILAQTGELTVEQADEKNLLLAKVDFMRDRPRDALA
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEEEEHHHHCCCHHHHH
KLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSERIKLESLLPDEESQVNNRRAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCEEE
WLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
EEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
ANQILPNPLDSISDKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIK
CHHCCCCCHHHHHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
VYDTSKGDITNTYRQAISDGAEYVVGPLTKTQVATIASMEHPVPTLLLNDTDASTQNNSY
EEECCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE
SLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTKAFINQWNEDGGHIVDSLRYE
EECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
LLKYYYAGDVPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYN
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCC
RLYALGVDSYTLATQLNQLILFPADGSSDSTGILYLKPTQQVARVLEWGQFKQGLAHSLG
EEEEECCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
DTV
CCC
>Mature Secondary Structure
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKTPYSLPTAAYLAMAKSQQG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC
YEKQSALISAAGRLITDGQWKQGTAILAQTGELTVEQADEKNLLLAKVDFMRDRPRDALA
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEEEEHHHHCCCHHHHH
KLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSERIKLESLLPDEESQVNNRRAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCEEE
WLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
EEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
ANQILPNPLDSISDKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIK
CHHCCCCCHHHHHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
VYDTSKGDITNTYRQAISDGAEYVVGPLTKTQVATIASMEHPVPTLLLNDTDASTQNNSY
EEECCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE
SLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTKAFINQWNEDGGHIVDSLRYE
EECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
LLKYYYAGDVPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYN
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCC
RLYALGVDSYTLATQLNQLILFPADGSSDSTGILYLKPTQQVARVLEWGQFKQGLAHSLG
EEEEECCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
DTV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]