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The map label for this gene is atpF

Identifier: 148361326

GI number: 148361326

Start: 3556391

End: 3556861

Strand: Reverse

Name: atpF

Synonym: LPC_3301

Alternate gene names: 148361326

Gene position: 3556861-3556391 (Counterclockwise)

Preceding gene: 148361327

Following gene: 148361325

Centisome position: 99.45

GC content: 38.64

Gene sequence:

>471_bases
TTGGATATTAATTTAACATTAATAGTTCAAATGTTGGTTTTTGCCGCGTTTGTACTGTTCACTATGAAATTAGTTTGGCC
ACCACTAGCAAAAGCACTTGAAGAAAGGCAAGATAAAATTGCTGATGGATTGGCTGCTGCTGAAAGAGGGCGTAAAGAGT
TGGAGTTGGCTCAACATCGTGTAAAAGATGAGTTAAAACAAGCCAAGGCTCACTCTGCTGATATTATTGATAAAGCGAAT
AAACGAGCATCAGAAATTATTGAAGCAGCAAAAGAGGCCGCAAAACGCGAAGCTCAAATTCAAGCAAAACTCGCGCAAGA
ACAAATTGCTCAACAAGTAAATCACGCCAAAGAAGAACTGAGAAAACAAGTTGCAAAGCTGGCTATTACTGGGGCAGAGA
AAATTTTAATGCGAGAGGTAGATGCAAAAGCGAATAGCGAACTGTTAGATAACCTAATAGAAGAGATTTAA

Upstream 100 bases:

>100_bases
ATTATTCTTTACCTTTGCTAACCCTTTCCTAAGCAGCCTGGGTTCTTGATAACACACAAATAGGGCGCTATGCGCCCTCA
CTGTTACAGGAGAATATACT

Downstream 100 bases:

>100_bases
AATGTCTGATAGTACCACTATAGCCAGACCCTATGCAAAAGCGATATTTGAACATGCTTTAGCAGAAAAAAAACTGAGTG
AATGGTCAGAATATCTTACA

Product: F0F1 ATP synthase subunit B

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDINLTLIVQMLVFAAFVLFTMKLVWPPLAKALEERQDKIADGLAAAERGRKELELAQHRVKDELKQAKAHSADIIDKAN
KRASEIIEAAKEAAKREAQIQAKLAQEQIAQQVNHAKEELRKQVAKLAITGAEKILMREVDAKANSELLDNLIEEI

Sequences:

>Translated_156_residues
MDINLTLIVQMLVFAAFVLFTMKLVWPPLAKALEERQDKIADGLAAAERGRKELELAQHRVKDELKQAKAHSADIIDKAN
KRASEIIEAAKEAAKREAQIQAKLAQEQIAQQVNHAKEELRKQVAKLAITGAEKILMREVDAKANSELLDNLIEEI
>Mature_156_residues
MDINLTLIVQMLVFAAFVLFTMKLVWPPLAKALEERQDKIADGLAAAERGRKELELAQHRVKDELKQAKAHSADIIDKAN
KRASEIIEAAKEAAKREAQIQAKLAQEQIAQQVNHAKEELRKQVAKLAITGAEKILMREVDAKANSELLDNLIEEI

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=50.6410256410256, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_LEGPA (Q5X0N9)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_125359.1
- ProteinModelPortal:   Q5X0N9
- STRING:   Q5X0N9
- GeneID:   3117326
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp3057
- LegioList:   lpp3057
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK05759
- BioCyc:   LPNE297246:LPP3057-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 17457; Mature: 17457

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x142f80d4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINLTLIVQMLVFAAFVLFTMKLVWPPLAKALEERQDKIADGLAAAERGRKELELAQHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDELKQAKAHSADIIDKANKRASEIIEAAKEAAKREAQIQAKLAQEQIAQQVNHAKEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVAKLAITGAEKILMREVDAKANSELLDNLIEEI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
>Mature Secondary Structure
MDINLTLIVQMLVFAAFVLFTMKLVWPPLAKALEERQDKIADGLAAAERGRKELELAQHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDELKQAKAHSADIIDKANKRASEIIEAAKEAAKREAQIQAKLAQEQIAQQVNHAKEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVAKLAITGAEKILMREVDAKANSELLDNLIEEI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA