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The map label for this gene is yhbY [C]

Identifier: 148361110

GI number: 148361110

Start: 3329498

End: 3329764

Strand: Direct

Name: yhbY [C]

Synonym: LPC_3084

Alternate gene names: 148361110

Gene position: 3329498-3329764 (Clockwise)

Preceding gene: 148361105

Following gene: 148361112

Centisome position: 93.09

GC content: 39.33

Gene sequence:

>267_bases
GTGGATACGTCTTTTAAACAATCACTTAAAGCCAAGGCTCATCATTTAAAGCCCGTTGTGCTCCTTGGCGCCAAAGGCTT
AACTGAAGCTATATTGGCAGAAACAAATGTAGCTTTGCTAGCACATGAATTAATTAAAGTCAAAATTAATGGGGCTGAAA
AGGAAGACAGAATGCAAATGGCCGAGGAGCTTTGTGAACAATTGCATGCCGAATTAGTTCAGATGATAGGAAATACACTG
GTTCTGTATCGTAAAAATGAGGAATGA

Upstream 100 bases:

>100_bases
CGAATAAAGATAAAACAATTTTTCCTATGATACAGAATTTTACTACCTTTTCCCAGCAAAACGTGCAATAATTTACCATT
TTATTATCTGGGATATCGCA

Downstream 100 bases:

>100_bases
AATTTGTAAAATCGTTTTGTAGCCTGGGGAATCAAAGCAAACCAACCTTTTTAAATCAAAGGATTTTCAAACTCCCGCAA
ATATAAATAACCCAATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MDTSFKQSLKAKAHHLKPVVLLGAKGLTEAILAETNVALLAHELIKVKINGAEKEDRMQMAEELCEQLHAELVQMIGNTL
VLYRKNEE

Sequences:

>Translated_88_residues
MDTSFKQSLKAKAHHLKPVVLLGAKGLTEAILAETNVALLAHELIKVKINGAEKEDRMQMAEELCEQLHAELVQMIGNTL
VLYRKNEE
>Mature_88_residues
MDTSFKQSLKAKAHHLKPVVLLGAKGLTEAILAETNVALLAHELIKVKINGAEKEDRMQMAEELCEQLHAELVQMIGNTL
VLYRKNEE

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=88, Percent_Identity=52.2727272727273, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 9837; Mature: 9837

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSFKQSLKAKAHHLKPVVLLGAKGLTEAILAETNVALLAHELIKVKINGAEKEDRMQM
CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
AEELCEQLHAELVQMIGNTLVLYRKNEE
HHHHHHHHHHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure
MDTSFKQSLKAKAHHLKPVVLLGAKGLTEAILAETNVALLAHELIKVKINGAEKEDRMQM
CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
AEELCEQLHAELVQMIGNTLVLYRKNEE
HHHHHHHHHHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]