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The map label for this gene is virG [H]

Identifier: 148361073

GI number: 148361073

Start: 3288630

End: 3289355

Strand: Direct

Name: virG [H]

Synonym: LPC_3044

Alternate gene names: 148361073

Gene position: 3288630-3289355 (Clockwise)

Preceding gene: 148361071

Following gene: 148361078

Centisome position: 91.95

GC content: 37.05

Gene sequence:

>726_bases
ATGTCACAACGCCACTATTTGCTATTTATTGATAATGAGCCTATCAGTGAAGAACTGAAAGATTACTTTGAAAAGTTTAA
TCTTGATATTATTCAACAAAAGAAATTGTTTCCTATTCATGTTGAAAAAGGATTACCTACAGCCATTTTAATTAATTGGT
CAATTTTAAGAACTGAACCAGAAGCAATTGAACAATTTTATAATATGTATCCAGTGCCATTAATTGTTATTAATAATAAA
CCTGATGAAGAATCAAGCGTTGCCATGCTTGAAGCCGGCGCTGATGATTTTCTGACCAAACCCATTTATCCCCGTGAGCT
GCATGCGCGAATTGGTGCTATTTCTCGTCGAGTAATCAGGGCGCAACAAAAAGTAGACCATGGTAAAGAAGTACTAATGT
TTGCTAACTGGCGACTTTATCCAGCTTCCAGACAAGTGTTCGGGGAGAATAATGAAGAATTGCAATTAAGCGCCGGTGAG
TATGATTTGCTTCTTACTTTTGTCCAACAACCGCAACGAGTCCTGGATAGAGAGTTTTTATTACAAATTACCAAAAATAC
AGACCTGGTTCCTTTTGACCGAAGGATTGATGTCCAAATTAGTCGTTTGCGTCAAAAAATCGAAATAGATAAAAAAAAGC
CAGCTTTAATCAAAACCATTCGCAATGGCGGCTACATGTTCACAGCTCGAGTTGTAACCCTTAAAGAAAGTGACGCCACA
TTATAA

Upstream 100 bases:

>100_bases
AAAAAGCTCTGGCAAGCATAAATATTTAAAAATAATTGCAAGCAACTGATAAACTTGCCAAAATTAAAGCAATATATTTT
TTGACCTTTGAGGCAAATTG

Downstream 100 bases:

>100_bases
TTGATTATTATCTGGCTTATTTAGACAAATTCGTTCATCTTATTTATCGAGTGCATTTTAATAACTATGGACTGATATTT
GCTTTATTGGCACAATGCCC

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSQRHYLLFIDNEPISEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRTEPEAIEQFYNMYPVPLIVINNK
PDEESSVAMLEAGADDFLTKPIYPRELHARIGAISRRVIRAQQKVDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGE
YDLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDAT
L

Sequences:

>Translated_241_residues
MSQRHYLLFIDNEPISEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRTEPEAIEQFYNMYPVPLIVINNK
PDEESSVAMLEAGADDFLTKPIYPRELHARIGAISRRVIRAQQKVDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGE
YDLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDAT
L
>Mature_240_residues
SQRHYLLFIDNEPISEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRTEPEAIEQFYNMYPVPLIVINNKP
DEESSVAMLEAGADDFLTKPIYPRELHARIGAISRRVIRAQQKVDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGEY
DLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDATL

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=159, Percent_Identity=36.4779874213836, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786599, Length=159, Percent_Identity=36.4779874213836, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=171, Percent_Identity=35.672514619883, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790863, Length=160, Percent_Identity=31.875, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787229, Length=247, Percent_Identity=28.3400809716599, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1790552, Length=160, Percent_Identity=34.375, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1788394, Length=235, Percent_Identity=27.2340425531915, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787375, Length=164, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786911, Length=167, Percent_Identity=29.3413173652695, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790860, Length=166, Percent_Identity=28.9156626506024, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693140, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003174
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28144; Mature: 28013

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRHYLLFIDNEPISEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRTEP
CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECCH
EAIEQFYNMYPVPLIVINNKPDEESSVAMLEAGADDFLTKPIYPRELHARIGAISRRVIR
HHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHH
AQQKVDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGEYDLLLTFVQQPQRVLDREFL
HHHHHCCCCEEEEEECEEEECCCHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHH
LQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDAT
EEECCCCCCCCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCC
L
C
>Mature Secondary Structure 
SQRHYLLFIDNEPISEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRTEP
CCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECCH
EAIEQFYNMYPVPLIVINNKPDEESSVAMLEAGADDFLTKPIYPRELHARIGAISRRVIR
HHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHH
AQQKVDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGEYDLLLTFVQQPQRVLDREFL
HHHHHCCCCEEEEEECEEEECCCHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHH
LQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDAT
EEECCCCCCCCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027669 [H]