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The map label for this gene is adrA [H]

Identifier: 148361010

GI number: 148361010

Start: 466082

End: 467152

Strand: Direct

Name: adrA [H]

Synonym: LPC_2970

Alternate gene names: 148361010

Gene position: 466082-467152 (Clockwise)

Preceding gene: 148361011

Following gene: 148361008

Centisome position: 13.03

GC content: 33.99

Gene sequence:

>1071_bases
ATGCATCAAAAGAAGCGGTCTTCATTGGAACTTGAAGCCTTACTGTCGTTATTTGAGGGATCCTTAAGAACTATCCCATT
CAATATCCTGGCGGTGATGGTGCTTTCTTTGGGTTTTATCTATACGAACCAGATTCCAATTAAACTGGTTATTATCTGTT
TTTTTCTCATTTTAATTTTAAGTGTGGTTCGTTGGGTAACTAGCCGAATTATAATCAGTAAAGAGTTTTACATCACAAAA
GGAAAGCAGGCTTTAATTGGTTTTTTACTGCTGAATTTTTTTATGGGACTGGCTTGGAGTTTGAGCTACTTTATTTTTTC
TCCTTATTTAAATGATACAAGTGAGTTTATTTTTGTATTCATTCTGGGGGGATTATCGACAGGCGCTATCGCTTCTTTAT
CAATTTATCTTCCCGCCTATTATGCTTACGTATTGCCAATGAATTTCCCAATTATTGCCTACAATTTGTATTTATTTCAG
TTTGATAAAGCAATTTTTGCTGTCATGTATTCGCTTTTTTTGATCATAGTATTGTTGACAGCAAGATTAAATTCAAAATT
ACTTTCCAAAGTAAGGGTATTATCTATAACCGATTCATTGACTGGATTATTTAACCGTCGTCATTTTGATGTGGTGTTCA
GAAATGAACTAAGCAGGGCGAAACGTAATAAATATCCTATCAGCCTGGTTTTCATTGATATAGATAATTTCAAGTATATT
AACGATACCTTTGGTCATTCTGTAGGTGACAGTTTTTTAATTCATGTATCAAATATCCTGAAGCAAACATTACGACGTTC
CAGCGATAGCTTGTTTCGGATTGGTGGAGATGAATATGCTGCCATTCTGATTAATATGCCACCAAGTGAAGCAATAACAG
TTTGTGCTTTGTTGCAAGAACAATTTAATAAAAAAAATCAATATAAAAATGTGTCGTTAAGTATGGGGGTCATAAGCATT
GATTCTATAAGAGTGATTGATCAACAAAGCGCCATTACTGCAGCGGATAAAACTCTTTATCAAGCAAAAAAAGCAGGGAA
AAATCAAATTAAATCTAAGTCGTTAGGCTAG

Upstream 100 bases:

>100_bases
CTAAATGGGATTTTAAATTATTTGCTGGGCGGTAAAGAGCAACTCTGTAAACTAGTCTATACTTGAAATTATAATGAAGG
TGCTTGGGTTTTGAATAATT

Downstream 100 bases:

>100_bases
CAAGAATTGAGAGTCAATTAAAATTGTTGGATTTGATTGCAGTAAGTATGAGATAAGAGAATACAATTTTATTTCTCTTA
TTCTTATATCAGAGACGGAT

Product: components of sensory transduction system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLSLGFIYTNQIPIKLVIICFFLILILSVVRWVTSRIIISKEFYITK
GKQALIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKAIFAVMYSLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSVGDSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQEQFNKKNQYKNVSLSMGVISI
DSIRVIDQQSAITAADKTLYQAKKAGKNQIKSKSLG

Sequences:

>Translated_356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLSLGFIYTNQIPIKLVIICFFLILILSVVRWVTSRIIISKEFYITK
GKQALIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKAIFAVMYSLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSVGDSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQEQFNKKNQYKNVSLSMGVISI
DSIRVIDQQSAITAADKTLYQAKKAGKNQIKSKSLG
>Mature_356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLSLGFIYTNQIPIKLVIICFFLILILSVVRWVTSRIIISKEFYITK
GKQALIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKAIFAVMYSLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSVGDSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQEQFNKKNQYKNVSLSMGVISI
DSIRVIDQQSAITAADKTLYQAKKAGKNQIKSKSLG

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=166, Percent_Identity=36.7469879518072, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=34.1772151898734, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87081977, Length=158, Percent_Identity=38.6075949367089, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082007, Length=198, Percent_Identity=29.2929292929293, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787262, Length=168, Percent_Identity=32.1428571428571, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87081974, Length=181, Percent_Identity=30.3867403314917, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788956, Length=171, Percent_Identity=35.672514619883, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787056, Length=153, Percent_Identity=32.6797385620915, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788381, Length=183, Percent_Identity=30.0546448087432, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081881, Length=167, Percent_Identity=29.3413173652695, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788085, Length=165, Percent_Identity=29.6969696969697, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787816, Length=178, Percent_Identity=29.7752808988764, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787541, Length=182, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 40375; Mature: 40375

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLSLGFIYTNQIPIKLVIICFFLILIL
CCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVVRWVTSRIIISKEFYITKGKQALIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVF
HHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQFDKAIFAVMYSLFLIIVLLT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNSKLLSKVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYI
HHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
NDTFGHSVGDSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQE
CHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHH
QFNKKNQYKNVSLSMGVISIDSIRVIDQQSAITAADKTLYQAKKAGKNQIKSKSLG
HHCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLSLGFIYTNQIPIKLVIICFFLILIL
CCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVVRWVTSRIIISKEFYITKGKQALIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVF
HHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQFDKAIFAVMYSLFLIIVLLT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNSKLLSKVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYI
HHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
NDTFGHSVGDSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQE
CHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHH
QFNKKNQYKNVSLSMGVISIDSIRVIDQQSAITAADKTLYQAKKAGKNQIKSKSLG
HHCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]