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The map label for this gene is ytfH [H]

Identifier: 148360950

GI number: 148360950

Start: 523778

End: 524158

Strand: Direct

Name: ytfH [H]

Synonym: LPC_2910

Alternate gene names: 148360950

Gene position: 523778-524158 (Clockwise)

Preceding gene: 148360951

Following gene: 148360947

Centisome position: 14.65

GC content: 35.96

Gene sequence:

>381_bases
ATGCCTCATCCTGATTATAGTGTTTATAACGAGAAGTGCCCATCGCATAATGTGCTTGAAGGTATTAGTGATAAATGGTC
TATATTGGTTATTAGCCTTTTATCCCAAAAAATATACCGTTTTGGAGAGTTAAAACGTGAAATCGGTGGAATATCACCTA
AAATGTTGACGCAAACATTACTGAAATTGGAGCGATATGGCTTTGTCCAAAGACAATCTTATCCTGTTTTACCTATGAAG
GTTGAGTATTCATTAACCAGATTGGGTAAGGAATTAAGTGCCATATTGGTTTTACTTACTCGTTGGACTGAAACCAATAT
GGATAAAATAATCAAAGCGGAAAAAACATTTTGCGAACAGAAGCTTGGTTGTCAAGCCTGA

Upstream 100 bases:

>100_bases
TGAACAGCATTTACAACGATTTAAGTTACTGATGAATAAAGCTCGAACCCATTTTATTCAGTTTGAAGGTCGTTATTAAT
TAGAAATAGGGAGTACAAAT

Downstream 100 bases:

>100_bases
TTTATTGAAACCATTTGATTAAAGTTTCCGAACCTAAATGGTCATGGATATAGGTTAAATAGCGGGTCAACTCCAGAGCA
TAATCCTCTTCAGAAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPHPDYSVYNEKCPSHNVLEGISDKWSILVISLLSQKIYRFGELKREIGGISPKMLTQTLLKLERYGFVQRQSYPVLPMK
VEYSLTRLGKELSAILVLLTRWTETNMDKIIKAEKTFCEQKLGCQA

Sequences:

>Translated_126_residues
MPHPDYSVYNEKCPSHNVLEGISDKWSILVISLLSQKIYRFGELKREIGGISPKMLTQTLLKLERYGFVQRQSYPVLPMK
VEYSLTRLGKELSAILVLLTRWTETNMDKIIKAEKTFCEQKLGCQA
>Mature_125_residues
PHPDYSVYNEKCPSHNVLEGISDKWSILVISLLSQKIYRFGELKREIGGISPKMLTQTLLKLERYGFVQRQSYPVLPMKV
EYSLTRLGKELSAILVLLTRWTETNMDKIIKAEKTFCEQKLGCQA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=105, Percent_Identity=41.9047619047619, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14552; Mature: 14421

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPDYSVYNEKCPSHNVLEGISDKWSILVISLLSQKIYRFGELKREIGGISPKMLTQTL
CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKLERYGFVQRQSYPVLPMKVEYSLTRLGKELSAILVLLTRWTETNMDKIIKAEKTFCEQ
HHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KLGCQA
HCCCCC
>Mature Secondary Structure 
PHPDYSVYNEKCPSHNVLEGISDKWSILVISLLSQKIYRFGELKREIGGISPKMLTQTL
CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKLERYGFVQRQSYPVLPMKVEYSLTRLGKELSAILVLLTRWTETNMDKIIKAEKTFCEQ
HHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KLGCQA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]