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The map label for this gene is ybhP [H]

Identifier: 148360915

GI number: 148360915

Start: 564002

End: 564757

Strand: Direct

Name: ybhP [H]

Synonym: LPC_2875

Alternate gene names: 148360915

Gene position: 564002-564757 (Clockwise)

Preceding gene: 148360917

Following gene: 148360912

Centisome position: 15.77

GC content: 38.62

Gene sequence:

>756_bases
ATGCAACCTGAGGTGCGCAGCGTATCGCTGATAACATATAATATTCATAAAGGTTTTGGAGTAGGTGCAGTAAGGTTTTT
GCTTCCAGAAATGCGTGATGCTATCGCTGGATTAAATCCGGACTTTGTTTTTTTACAAGAAGTGCAAGGTAAACATAGAA
AACGCGAAAAAAGAATTGTCAGTTGGCCTGATTCCCCTCAATGTGAATACATTGCTGAGAATATATGGCCACATTACGTT
TATGCAAAGAATGCAGTATATCAATCTGGCCACCACGGAAATGCTATTTTAAGCAAATACCCGTTCGAGAGTTTTGAAAG
TATTAATCTTTCAAACATGAACAGAGCATCAAGAGGTATACTTCATACCCAATTAAAATTGGATAATAATATTATTCATC
TTTTGTGTGTTCATTTAGGCCTATTCAAGGCAGAGCGCACTGAGCAATGTAAGGCATTGATACAACGTATTAAAGATGTT
GTGCCTAAAAATGAGCCTTTGATAATGGCAGGAGACTTTAATGATTGGCGTCATGTTATTTCTAAAATCCTTGCTGAAAA
CTTAGGGATTGAAGAAGCTTTTGTCGCGCTCGAAGGACAACATGCCCGTTCATTTCCTGCAATAAAACCTGCTTTGTGTG
TCGACAGGGTGTATTTTCGCGGGATGAAAGTTCAAGAGGTTGCTTGTTTACAGGGCAAACCTTGGCGGATGTTATCTGAT
CATTTACCCTTGTATGCACGTTTTGAATTATTATGA

Upstream 100 bases:

>100_bases
ACAAATTCTTTTCAAAATGTGGGTTATAATTATAGAGCAATACATTAATCCTATTACCATTATACTGATTATAGAAACCT
AAATGAGAGATAGAGTATCT

Downstream 100 bases:

>100_bases
CAGGGCTACCTCCAGTCTCTTTGTTGAAAAAGATTTTTAATGCGGTCATTTGGTTTATTCTAACTCCCACATTTAAAATT
TTTTTGCCTTGACCTTGGGG

Product: endonuclease/exonuclease/phosphatase family transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQPEVRSVSLITYNIHKGFGVGAVRFLLPEMRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYV
YAKNAVYQSGHHGNAILSKYPFESFESINLSNMNRASRGILHTQLKLDNNIIHLLCVHLGLFKAERTEQCKALIQRIKDV
VPKNEPLIMAGDFNDWRHVISKILAENLGIEEAFVALEGQHARSFPAIKPALCVDRVYFRGMKVQEVACLQGKPWRMLSD
HLPLYARFELL

Sequences:

>Translated_251_residues
MQPEVRSVSLITYNIHKGFGVGAVRFLLPEMRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYV
YAKNAVYQSGHHGNAILSKYPFESFESINLSNMNRASRGILHTQLKLDNNIIHLLCVHLGLFKAERTEQCKALIQRIKDV
VPKNEPLIMAGDFNDWRHVISKILAENLGIEEAFVALEGQHARSFPAIKPALCVDRVYFRGMKVQEVACLQGKPWRMLSD
HLPLYARFELL
>Mature_251_residues
MQPEVRSVSLITYNIHKGFGVGAVRFLLPEMRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYV
YAKNAVYQSGHHGNAILSKYPFESFESINLSNMNRASRGILHTQLKLDNNIIHLLCVHLGLFKAERTEQCKALIQRIKDV
VPKNEPLIMAGDFNDWRHVISKILAENLGIEEAFVALEGQHARSFPAIKPALCVDRVYFRGMKVQEVACLQGKPWRMLSD
HLPLYARFELL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=251, Percent_Identity=39.8406374501992, Blast_Score=203, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28802; Mature: 28802

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPEVRSVSLITYNIHKGFGVGAVRFLLPEMRDAIAGLNPDFVFLQEVQGKHRKREKRIV
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCEE
SWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSNMNRASRGI
CCCCCCCHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHCCCCHHHCCCCCCCCCHHHCCE
LHTQLKLDNNIIHLLCVHLGLFKAERTEQCKALIQRIKDVVPKNEPLIMAGDFNDWRHVI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
SKILAENLGIEEAFVALEGQHARSFPAIKPALCVDRVYFRGMKVQEVACLQGKPWRMLSD
HHHHHHHCCHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH
HLPLYARFELL
CCCEEEEEECC
>Mature Secondary Structure
MQPEVRSVSLITYNIHKGFGVGAVRFLLPEMRDAIAGLNPDFVFLQEVQGKHRKREKRIV
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCEE
SWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSNMNRASRGI
CCCCCCCHHHHHHHCCCCEEEECCHHHCCCCCCCCHHHCCCCHHHCCCCCCCCCHHHCCE
LHTQLKLDNNIIHLLCVHLGLFKAERTEQCKALIQRIKDVVPKNEPLIMAGDFNDWRHVI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
SKILAENLGIEEAFVALEGQHARSFPAIKPALCVDRVYFRGMKVQEVACLQGKPWRMLSD
HHHHHHHCCHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH
HLPLYARFELL
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]