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The map label for this gene is yqiX [H]

Identifier: 148360895

GI number: 148360895

Start: 580882

End: 581616

Strand: Direct

Name: yqiX [H]

Synonym: LPC_2855

Alternate gene names: 148360895

Gene position: 580882-581616 (Clockwise)

Preceding gene: 148360897

Following gene: 148360894

Centisome position: 16.24

GC content: 35.92

Gene sequence:

>735_bases
ATGAGAAAAGTTTTTAGTTTATTGTTAATTAGTTCAATTATAGTTATATCCAGTTGTAGTGAGCAAAAAAATCAAAATAC
ACTGCGTTTTTCCACTTCAGCAGAATATCCACCTTTTGAATATATTGAAAACGGAGAAATAAAAGGATTTGACATTGATT
TGGCAAAATTGATCGCCAAAGAGCTAGGTAAAGAAGCAGTTTTTGACAACATGCAGTTTAGTGCGGTTTTGCCTGCTGTG
AATTCAGGCCAGGATGACGTTGCGATTGCCACAATTACTATTACCGAGGAACGTAAGAAAAATTTTGATTTTTCCAAACC
TTATTATTTTGAAGGAATGGCTGCAGTTTTTGATAATTCACAGCCAGTGAAAGAAATCTCGCAATTAACAGGAAAAAAAA
TAGCAGTCCAGCTAGGTAGTGTTATGGAAATTTGGCTTCATCAAAACTTTCCTAAAGCTGAAATTATGGCTTTGGATAAT
AACAACCAAGCGATAGAAGCTTTAATCGCAGGTCATGTTGATGTGGTCCTTATGGATGGGGCACAAGGGGGTGTTTATAG
CAAGAAATATCCAGGACTGTCTTATTCTATCCTGGCGAAAGCTAATGAAGGTTATGGATTGGTCTTAAAAAAAGGTTCTC
CTCTAAGGGATGAAATCAATTCCGCATTGGAAAATCTTAAAGCGAAGGGTGAAATTCAAAAATTGGAATCTATTTGGATA
AAGGGGTCAATATGA

Upstream 100 bases:

>100_bases
ATATAAATTACTAAAATTGAAATTATATCCATTTTTTCTTGACAGTACAAATCTCGATCATGTATATTCAAAAAATGGAT
AAATATGGGATTCATATTCA

Downstream 100 bases:

>100_bases
CGGAGATAGTGCAAAATCTGTTTTTCATTGGCAAAGGAATAGTTCTAACTATGCAATTATTAACAGGAGGTATGCTGATT
GGAGTATTACTTGGAACTCT

Product: amino acid (glutamine) ABC transporter periplasmic amino acid binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRKVFSLLLISSIIVISSCSEQKNQNTLRFSTSAEYPPFEYIENGEIKGFDIDLAKLIAKELGKEAVFDNMQFSAVLPAV
NSGQDDVAIATITITEERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAVQLGSVMEIWLHQNFPKAEIMALDN
NNQAIEALIAGHVDVVLMDGAQGGVYSKKYPGLSYSILAKANEGYGLVLKKGSPLRDEINSALENLKAKGEIQKLESIWI
KGSI

Sequences:

>Translated_244_residues
MRKVFSLLLISSIIVISSCSEQKNQNTLRFSTSAEYPPFEYIENGEIKGFDIDLAKLIAKELGKEAVFDNMQFSAVLPAV
NSGQDDVAIATITITEERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAVQLGSVMEIWLHQNFPKAEIMALDN
NNQAIEALIAGHVDVVLMDGAQGGVYSKKYPGLSYSILAKANEGYGLVLKKGSPLRDEINSALENLKAKGEIQKLESIWI
KGSI
>Mature_244_residues
MRKVFSLLLISSIIVISSCSEQKNQNTLRFSTSAEYPPFEYIENGEIKGFDIDLAKLIAKELGKEAVFDNMQFSAVLPAV
NSGQDDVAIATITITEERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAVQLGSVMEIWLHQNFPKAEIMALDN
NNQAIEALIAGHVDVVLMDGAQGGVYSKKYPGLSYSILAKANEGYGLVLKKGSPLRDEINSALENLKAKGEIQKLESIWI
KGSI

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=251, Percent_Identity=29.8804780876494, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787085, Length=247, Percent_Identity=31.9838056680162, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=30.4, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=30.7377049180328, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788648, Length=222, Percent_Identity=27.9279279279279, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788649, Length=246, Percent_Identity=24.390243902439, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 26904; Mature: 26904

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVFSLLLISSIIVISSCSEQKNQNTLRFSTSAEYPPFEYIENGEIKGFDIDLAKLIAK
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEEECHHHHHHHHH
ELGKEAVFDNMQFSAVLPAVNSGQDDVAIATITITEERKKNFDFSKPYYFEGMAAVFDNS
HHCHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCHHCCHHEECCCC
QPVKEISQLTGKKIAVQLGSVMEIWLHQNFPKAEIMALDNNNQAIEALIAGHVDVVLMDG
CCHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEEC
AQGGVYSKKYPGLSYSILAKANEGYGLVLKKGSPLRDEINSALENLKAKGEIQKLESIWI
CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHEEE
KGSI
ECCC
>Mature Secondary Structure
MRKVFSLLLISSIIVISSCSEQKNQNTLRFSTSAEYPPFEYIENGEIKGFDIDLAKLIAK
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEEECHHHHHHHHH
ELGKEAVFDNMQFSAVLPAVNSGQDDVAIATITITEERKKNFDFSKPYYFEGMAAVFDNS
HHCHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCHHCCHHEECCCC
QPVKEISQLTGKKIAVQLGSVMEIWLHQNFPKAEIMALDNNNQAIEALIAGHVDVVLMDG
CCHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEEC
AQGGVYSKKYPGLSYSILAKANEGYGLVLKKGSPLRDEINSALENLKAKGEIQKLESIWI
CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHEEE
KGSI
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]