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The map label for this gene is hsdM [C]

Identifier: 148360830

GI number: 148360830

Start: 639466

End: 641496

Strand: Direct

Name: hsdM [C]

Synonym: LPC_2790

Alternate gene names: 148360830

Gene position: 639466-641496 (Clockwise)

Preceding gene: 148360831

Following gene: 148360829

Centisome position: 17.88

GC content: 39.09

Gene sequence:

>2031_bases
ATGAAGAATGAAAATAATAAAAAGATACAAAATCTGAGTACATTTTCATGGTCTATAGCTGAAATACTGCGAGGCGATTT
TAAGCAGTCAGAATATGGTAAGGTTATCTTGCCATTTGTTGTTTTGCGTCGATTGGATTGTATTTTAGAACCTTCAAAAG
ATGCTGTAATTAGTGCGTATGAAAATTTACCTGAAGGGATTGATGATCATACTAAAGACATGATGCTATTTAGTGCTGTT
GGTGGTGGCCTGAAAGTTTATAACTACAATACGCTCACCTTTAGTAAAATTCGAAATCAAGATCCAGGTGATGTACATAA
GAATTTATTAGACTATATCACCAGTTTTAATAGCAGCGTTCGCGATATTTTTCTTGAAAAATTTCTCTTTACTGATCAGC
TTAAGCGCCTAAAGGATGGTGGAATTTTATGGCAAGTATTCGATCGTTTCTGCCAGATAGATTTACATCCTGATAATGTT
TCCAACATGGAGATGGGGTATCTCTTTGAAGATTTGATTCGCCGTTTTTCTGAAATTTCGAATGAGACGGCAGGGGAACA
TTTCACACCTCGTGAAGTCATTCGTTTGATTGTGGATCTTTTGTTGATTAATGATGCCGAAGCATTGGCTGGTTCAGGAA
TCATTCGCACAGTTTATGATCCTGCCTGTGGAACAGGCGGTATGCTTGCACTTATGGAAGAGGCAATGAAGGAATATAAC
TCTAAAATTCGTGTCGAGCTCTACGGGCAGGAACTAAACCCAGAATCCTTCGGTATCTGCACGTCTGACATGCTGGTGAC
AGGTCATAACCCAGAGCAAATTGCTTTCGGTAACACGTTAACAGAAGATGCTCACAAGGATAAAAAATTTCATTATATGC
TTTCCAATCCTCCGTATGGGGTAGATTGGAAAAAGTACCAAGACCCTATTAAGCAAGAAGCGCAAGAAAAAGGGATGGAT
GGTCGTTTTGGTGCTGGGCTACCGCGTATATCTGATGGACAGTTGCTTTTCCTGCAGCACATGATATCAAAAATGCGAGA
TGATGAAGTAGGCTCACGCATTGGTATAGTGATGAATGGCTCTCCTCTTTTTACAGGTGGAGCAGGCTCTGGTGAAAGTG
AAATTCGCCGCTGGATGTTTGAAAATGATTGGGTAGAGGCGATTATCGCATTACCTACCGATTTGTTTTACAACACCGGT
ATTCAAACCTATGTTTGGATGCTTACCAATAAGAAGGATAAGAACCGTCGGGGAAAGGTGCAGCTCATTGATGCAAGTAG
CGAACGATTTTGGCAATCCATGCGAAAAAGTCTTGGTAGCAAACGTCGAGAGATTTCTGATCATGCGCGTAGTGAAATTG
TTAAAATTTATTATGAAATGCTCAATGGTGGTGGTGATTGGAGCGAATTTTCTAAAATTTTTGATAGGCAAGAGTTTGGT
TATCGAGAAATACGCATTGAGCGGCCTTTGAGGCTAAATTTTGAAGGAAGCAAAGAGCGCTTAGAATTGCTTCAACAAGA
AAATACGTTTCTAAAACTTTCCGAAATAGAGCAACAAGAATTATTAACCGCACTTAATCACAACACATTAAAACAGCAAT
TTAAAAATCGTGATGCATTTGAGAAAGCACTTAAAACAGCATTAAAAAATTTAAGTTTCAAGTTAACTGCCCCATTAAAA
AAAGCGATTCTTACAACGCTTTCAGAGAAAGACGAAACTGCTGATATTTGTTGTGACGCTAAAGGCAATCCTGAACCTGA
TACAGATTTACGCGATCATGAATTAGTACCTCTAAAAGAAGATTGGCGAGAATATGTTGAACGAGAAGTAAAACCTTTTG
TTGCCGATGCTTGGGTAGATGAAAATCACAAGGATGCCACCGATGGCAAGGTAGGTCGTGTGGGGTATGAAATTAATTTT
AATCGTTATTTCTATAAATATGTTCCACCGCGTCCTGTAGCCGAGATAAATGAAGAGCTTAAACAATTGGAAGCGGAAAT
TGCTAACTTGCTGAAAGAGGTAGTAGCATGA

Upstream 100 bases:

>100_bases
TTGTTAGCATCAGCTTCAATGATGACTGTTTCTTGCGCATTTATGTTGTTCTTACTTATTAATTTTGCGAGATAACTCAT
GCATCCAATTGGAACCAAAG

Downstream 100 bases:

>100_bases
ACCATCAGACTTTCTTGGACAAATTTGTAAATAATTATCGATGGAAATCTGTTCCTACAAAACGAAACTTTAGAAATATA
AAACAAATTAACAAGGGTTT

Product: putative type I restriction enzyme M protein

Products: NA

Alternate protein names: M.HindVIIP [H]

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MKNENNKKIQNLSTFSWSIAEILRGDFKQSEYGKVILPFVVLRRLDCILEPSKDAVISAYENLPEGIDDHTKDMMLFSAV
GGGLKVYNYNTLTFSKIRNQDPGDVHKNLLDYITSFNSSVRDIFLEKFLFTDQLKRLKDGGILWQVFDRFCQIDLHPDNV
SNMEMGYLFEDLIRRFSEISNETAGEHFTPREVIRLIVDLLLINDAEALAGSGIIRTVYDPACGTGGMLALMEEAMKEYN
SKIRVELYGQELNPESFGICTSDMLVTGHNPEQIAFGNTLTEDAHKDKKFHYMLSNPPYGVDWKKYQDPIKQEAQEKGMD
GRFGAGLPRISDGQLLFLQHMISKMRDDEVGSRIGIVMNGSPLFTGGAGSGESEIRRWMFENDWVEAIIALPTDLFYNTG
IQTYVWMLTNKKDKNRRGKVQLIDASSERFWQSMRKSLGSKRREISDHARSEIVKIYYEMLNGGGDWSEFSKIFDRQEFG
YREIRIERPLRLNFEGSKERLELLQQENTFLKLSEIEQQELLTALNHNTLKQQFKNRDAFEKALKTALKNLSFKLTAPLK
KAILTTLSEKDETADICCDAKGNPEPDTDLRDHELVPLKEDWREYVEREVKPFVADAWVDENHKDATDGKVGRVGYEINF
NRYFYKYVPPRPVAEINEELKQLEAEIANLLKEVVA

Sequences:

>Translated_676_residues
MKNENNKKIQNLSTFSWSIAEILRGDFKQSEYGKVILPFVVLRRLDCILEPSKDAVISAYENLPEGIDDHTKDMMLFSAV
GGGLKVYNYNTLTFSKIRNQDPGDVHKNLLDYITSFNSSVRDIFLEKFLFTDQLKRLKDGGILWQVFDRFCQIDLHPDNV
SNMEMGYLFEDLIRRFSEISNETAGEHFTPREVIRLIVDLLLINDAEALAGSGIIRTVYDPACGTGGMLALMEEAMKEYN
SKIRVELYGQELNPESFGICTSDMLVTGHNPEQIAFGNTLTEDAHKDKKFHYMLSNPPYGVDWKKYQDPIKQEAQEKGMD
GRFGAGLPRISDGQLLFLQHMISKMRDDEVGSRIGIVMNGSPLFTGGAGSGESEIRRWMFENDWVEAIIALPTDLFYNTG
IQTYVWMLTNKKDKNRRGKVQLIDASSERFWQSMRKSLGSKRREISDHARSEIVKIYYEMLNGGGDWSEFSKIFDRQEFG
YREIRIERPLRLNFEGSKERLELLQQENTFLKLSEIEQQELLTALNHNTLKQQFKNRDAFEKALKTALKNLSFKLTAPLK
KAILTTLSEKDETADICCDAKGNPEPDTDLRDHELVPLKEDWREYVEREVKPFVADAWVDENHKDATDGKVGRVGYEINF
NRYFYKYVPPRPVAEINEELKQLEAEIANLLKEVVA
>Mature_676_residues
MKNENNKKIQNLSTFSWSIAEILRGDFKQSEYGKVILPFVVLRRLDCILEPSKDAVISAYENLPEGIDDHTKDMMLFSAV
GGGLKVYNYNTLTFSKIRNQDPGDVHKNLLDYITSFNSSVRDIFLEKFLFTDQLKRLKDGGILWQVFDRFCQIDLHPDNV
SNMEMGYLFEDLIRRFSEISNETAGEHFTPREVIRLIVDLLLINDAEALAGSGIIRTVYDPACGTGGMLALMEEAMKEYN
SKIRVELYGQELNPESFGICTSDMLVTGHNPEQIAFGNTLTEDAHKDKKFHYMLSNPPYGVDWKKYQDPIKQEAQEKGMD
GRFGAGLPRISDGQLLFLQHMISKMRDDEVGSRIGIVMNGSPLFTGGAGSGESEIRRWMFENDWVEAIIALPTDLFYNTG
IQTYVWMLTNKKDKNRRGKVQLIDASSERFWQSMRKSLGSKRREISDHARSEIVKIYYEMLNGGGDWSEFSKIFDRQEFG
YREIRIERPLRLNFEGSKERLELLQQENTFLKLSEIEQQELLTALNHNTLKQQFKNRDAFEKALKTALKNLSFKLTAPLK
KAILTTLSEKDETADICCDAKGNPEPDTDLRDHELVPLKEDWREYVEREVKPFVADAWVDENHKDATDGKVGRVGYEINF
NRYFYKYVPPRPVAEINEELKQLEAEIANLLKEVVA

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790808, Length=353, Percent_Identity=26.3456090651558, Blast_Score=90, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003356
- InterPro:   IPR002296 [H]

Pfam domain/function: PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 77755; Mature: 77755

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNENNKKIQNLSTFSWSIAEILRGDFKQSEYGKVILPFVVLRRLDCILEPSKDAVISAY
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
ENLPEGIDDHTKDMMLFSAVGGGLKVYNYNTLTFSKIRNQDPGDVHKNLLDYITSFNSSV
HHCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHCHHH
RDIFLEKFLFTDQLKRLKDGGILWQVFDRFCQIDLHPDNVSNMEMGYLFEDLIRRFSEIS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHC
NETAGEHFTPREVIRLIVDLLLINDAEALAGSGIIRTVYDPACGTGGMLALMEEAMKEYN
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC
SKIRVELYGQELNPESFGICTSDMLVTGHNPEQIAFGNTLTEDAHKDKKFHYMLSNPPYG
CEEEEEEECCCCCCCCCCCEECCEEEECCCCCCEECCCCCCHHHHCCCCEEEEECCCCCC
VDWKKYQDPIKQEAQEKGMDGRFGAGLPRISDGQLLFLQHMISKMRDDEVGSRIGIVMNG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCEEEEEECC
SPLFTGGAGSGESEIRRWMFENDWVEAIIALPTDLFYNTGIQTYVWMLTNKKDKNRRGKV
CEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCE
QLIDASSERFWQSMRKSLGSKRREISDHARSEIVKIYYEMLNGGGDWSEFSKIFDRQEFG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
YREIRIERPLRLNFEGSKERLELLQQENTFLKLSEIEQQELLTALNHNTLKQQFKNRDAF
CEEEEECCCEEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EKALKTALKNLSFKLTAPLKKAILTTLSEKDETADICCDAKGNPEPDTDLRDHELVPLKE
HHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHH
DWREYVEREVKPFVADAWVDENHKDATDGKVGRVGYEINFNRYFYKYVPPRPVAEINEEL
HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEEEECEEEEEECCCCCHHHHHHHH
KQLEAEIANLLKEVVA
HHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKNENNKKIQNLSTFSWSIAEILRGDFKQSEYGKVILPFVVLRRLDCILEPSKDAVISAY
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
ENLPEGIDDHTKDMMLFSAVGGGLKVYNYNTLTFSKIRNQDPGDVHKNLLDYITSFNSSV
HHCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHCHHH
RDIFLEKFLFTDQLKRLKDGGILWQVFDRFCQIDLHPDNVSNMEMGYLFEDLIRRFSEIS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHC
NETAGEHFTPREVIRLIVDLLLINDAEALAGSGIIRTVYDPACGTGGMLALMEEAMKEYN
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC
SKIRVELYGQELNPESFGICTSDMLVTGHNPEQIAFGNTLTEDAHKDKKFHYMLSNPPYG
CEEEEEEECCCCCCCCCCCEECCEEEECCCCCCEECCCCCCHHHHCCCCEEEEECCCCCC
VDWKKYQDPIKQEAQEKGMDGRFGAGLPRISDGQLLFLQHMISKMRDDEVGSRIGIVMNG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCEEEEEECC
SPLFTGGAGSGESEIRRWMFENDWVEAIIALPTDLFYNTGIQTYVWMLTNKKDKNRRGKV
CEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCE
QLIDASSERFWQSMRKSLGSKRREISDHARSEIVKIYYEMLNGGGDWSEFSKIFDRQEFG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
YREIRIERPLRLNFEGSKERLELLQQENTFLKLSEIEQQELLTALNHNTLKQQFKNRDAF
CEEEEECCCEEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EKALKTALKNLSFKLTAPLKKAILTTLSEKDETADICCDAKGNPEPDTDLRDHELVPLKE
HHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHH
DWREYVEREVKPFVADAWVDENHKDATDGKVGRVGYEINFNRYFYKYVPPRPVAEINEEL
HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEEEECEEEEEECCCCCHHHHHHHH
KQLEAEIANLLKEVVA
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]