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The map label for this gene is 148360643

Identifier: 148360643

GI number: 148360643

Start: 879616

End: 880053

Strand: Direct

Name: 148360643

Synonym: LPC_2589

Alternate gene names: NA

Gene position: 879616-880053 (Clockwise)

Preceding gene: 148360644

Following gene: 148360642

Centisome position: 24.59

GC content: 42.01

Gene sequence:

>438_bases
ATGGATTATATAACCTCTTTTACTCCTTATCTAAGTGCCATTGGTGGATTACTGATTGGCTTAAGTGCTGTCCTTTTTTT
ATGGTTAAACGGCCGTATAGCAGGCATCAGTGGAATGGTACACGGACTCTTTCCACCTGAAAAACCATTCCCAGTCTGGC
GTATTGCCTTTTTACTTGGTTTGGCAGCTGCAGGATTGATCTATTTCATAAGCCCTGTTATCCAGTTTCCATTAAGAACA
CATTATCCGGTTTTCCTGTTACTAATTGGTGGATTTTTGGTGGGTTTTGGAACCCGAATGGGCCAAGGTTGTACTTCGGG
ACACGGGGTATGTGGACTGGCCAGATTTTCCAAGCGCTCCTTTATAGCGACACTGCTTTTTATCTTATCTGCAATGATTA
CTGTGTATCTGATAAGACATGTGGGAGGATTATATTAA

Upstream 100 bases:

>100_bases
TATTGTTTTAAAACATCAATGTAATTTGAGAGACACTTTAATTTTTTAAAGTGTCTCAATTCAGGTGTTATTCATTGTAA
ATGAAACGGAAATGTAAATA

Downstream 100 bases:

>100_bases
TGTATAACATCATGTCATTTCTATGTGGTTTGTTATTTGGAGCCGGGTTGACTATTTCAAATATGATCAATCCTAACAAG
GTATTAAATTTTCTTGATAT

Product: transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDYITSFTPYLSAIGGLLIGLSAVLFLWLNGRIAGISGMVHGLFPPEKPFPVWRIAFLLGLAAAGLIYFISPVIQFPLRT
HYPVFLLLIGGFLVGFGTRMGQGCTSGHGVCGLARFSKRSFIATLLFILSAMITVYLIRHVGGLY

Sequences:

>Translated_145_residues
MDYITSFTPYLSAIGGLLIGLSAVLFLWLNGRIAGISGMVHGLFPPEKPFPVWRIAFLLGLAAAGLIYFISPVIQFPLRT
HYPVFLLLIGGFLVGFGTRMGQGCTSGHGVCGLARFSKRSFIATLLFILSAMITVYLIRHVGGLY
>Mature_145_residues
MDYITSFTPYLSAIGGLLIGLSAVLFLWLNGRIAGISGMVHGLFPPEKPFPVWRIAFLLGLAAAGLIYFISPVIQFPLRT
HYPVFLLLIGGFLVGFGTRMGQGCTSGHGVCGLARFSKRSFIATLLFILSAMITVYLIRHVGGLY

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 15726; Mature: 15726

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYITSFTPYLSAIGGLLIGLSAVLFLWLNGRIAGISGMVHGLFPPEKPFPVWRIAFLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LAAAGLIYFISPVIQFPLRTHYPVFLLLIGGFLVGFGTRMGQGCTSGHGVCGLARFSKRS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FIATLLFILSAMITVYLIRHVGGLY
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYITSFTPYLSAIGGLLIGLSAVLFLWLNGRIAGISGMVHGLFPPEKPFPVWRIAFLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LAAAGLIYFISPVIQFPLRTHYPVFLLLIGGFLVGFGTRMGQGCTSGHGVCGLARFSKRS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FIATLLFILSAMITVYLIRHVGGLY
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]