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The map label for this gene is fas5 [H]

Identifier: 148360460

GI number: 148360460

Start: 1075735

End: 1077105

Strand: Direct

Name: fas5 [H]

Synonym: LPC_2399

Alternate gene names: 148360460

Gene position: 1075735-1077105 (Clockwise)

Preceding gene: 148360461

Following gene: 148360459

Centisome position: 30.08

GC content: 39.02

Gene sequence:

>1371_bases
ATGTCGCAAAATCAGTGGAGCTTAGAGAAAATCAAGCAGTATAAGGAAGATACCGGACAAGCATTGCTCAGTGATGAGCA
ATCGCTTGTTTTATTTGGTCAGGATTTTGGCAAGCTCATTCAATCACAGCCGGTAGCTGTGTCTGCCCCTCAAAATATAG
AGTCATTGCAATCATTAATTTTATTCGCCAATCAATATCACTTACCAGTGACTATTCGTGGTAATGGTTTAAGTCAAGGT
GGCCAATCATTACCTGTTCCTGGAGGACTAACAATTTCTATGCAGTCTTTCAACAAGCCACTTGATTTGAGTGAAGATCT
CATCTGGGTTGAGGCTAATACCAGTTGGAAGAATCTGCTTGAAAAATCACTACTGAAAAATAAAGCCCCCTATGTGCTGC
CTTATAACTGTAATTTGTCGGTTGGGGGTGTTTTATCTGCAGGAGGAATAGGAGCTTCCTCTTTTAAATACGGTGTTATT
AATGCTTATGTTTCAGCATTGGAAGTGGTTGATGGTTTGGGGAGAAAGCAAATCGTTGAAAAAAACTCACCTCTATTTCA
AGCCTGCCTTTCAGGGCAAGGTCGATTTGGTGTCATTACCAAGGCATGTATTCAGTTACGATCAGTTCAGCCACGCGTCA
AAACTTTCTTTCTGGTTTATGCAGATCAGAATCAATGGTTTGAAGATATTTATAAAATACAGGGTAAAGTCGATTATATG
GAGATATTTTGCTCTCCTTCAATTCAGGGAGCTCGATTGAAAGAAGATAAACGTGTTCCCATGGCTTATTGGTTGTATGG
CTTGCACCTATCTGTTGAATATGATCGGCATGCAGAAGATATTTTAGGGCAGTTAAAGCCATGGAATGTCCTGAATATAC
AGGAAGAGAGTATTTTATCTTATTTTTTAAGGCATAACTCTCGCTTTGATATGATGAAGTTGACAGGGCAATGGGATTTG
TTACATCCTTGGTATGAATGTTTTGTTCCTACCTCATTTTTAACAGGAGTACTTTCCCAACTGTTAGAGGAGTTACCGCT
TCACTATGCCAGTTTGGTTCATGTTGTTCCAATTGCCAAGCAAAAAGCCGGGTTTATGATGTTACCAGACTGCGATTCAA
TTTGTGAATTTATGATTTTAAATCCAGGGGTACCTTATTCCCTAGAGGAAAGTTGCCTGAAGGCTATCGAGAATCTCGAT
AAGCACTTGCTGCAAAATAATGGTAAACGCTATTTATCAGGATACTTAGGTACAGAATTACCAGACAACTATTGGCTAAA
GCATTTTGGAGAAAAATACGACTCATGGGTAGGTTTGAAAAAACAGTATGATCCAGCAGGGATTTTTTCATCGATGTTAC
ATCATATATAA

Upstream 100 bases:

>100_bases
AGGATGGTAGATCGTTGCTATGATGCATTCAGCAAGATGTTTGATGGATTGATTCTTGCTTGCAATAAACGATTGGAATT
GGCAAAAGAAAGGAATCAAC

Downstream 100 bases:

>100_bases
AAAATAGTATTGTGCAAACTCATGCTTCGTAACAGATATCAAGGCATGGTGGTCGATCTGATGCATAAAGGTATGAATTC
AGCCTGGATAAAGATATATT

Product: cytokinin oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQNIESLQSLILFANQYHLPVTIRGNGLSQG
GQSLPVPGGLTISMQSFNKPLDLSEDLIWVEANTSWKNLLEKSLLKNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVI
NAYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
EIFCSPSIQGARLKEDKRVPMAYWLYGLHLSVEYDRHAEDILGQLKPWNVLNIQEESILSYFLRHNSRFDMMKLTGQWDL
LHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLD
KHLLQNNGKRYLSGYLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI

Sequences:

>Translated_456_residues
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQNIESLQSLILFANQYHLPVTIRGNGLSQG
GQSLPVPGGLTISMQSFNKPLDLSEDLIWVEANTSWKNLLEKSLLKNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVI
NAYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
EIFCSPSIQGARLKEDKRVPMAYWLYGLHLSVEYDRHAEDILGQLKPWNVLNIQEESILSYFLRHNSRFDMMKLTGQWDL
LHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLD
KHLLQNNGKRYLSGYLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
>Mature_455_residues
SQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQNIESLQSLILFANQYHLPVTIRGNGLSQGG
QSLPVPGGLTISMQSFNKPLDLSEDLIWVEANTSWKNLLEKSLLKNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVIN
AYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYME
IFCSPSIQGARLKEDKRVPMAYWLYGLHLSVEYDRHAEDILGQLKPWNVLNIQEESILSYFLRHNSRFDMMKLTGQWDLL
HPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDK
HLLQNNGKRYLSGYLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI

Specific function: The FAS-operon encodes genes involved in cytokinin production and in host plant fasciation (leafy gall) [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015345
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF09265 Cytokin-bind; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51537; Mature: 51406

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQNIESLQSLI
CCCCCHHHHHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHCCCCEEECCCCHHHHHHHH
LFANQYHLPVTIRGNGLSQGGQSLPVPGGLTISMQSFNKPLDLSEDLIWVEANTSWKNLL
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEECCCHHHHHH
EKSLLKNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVINAYVSALEVVDGLGRKQIVE
HHHHHHCCCCEEEEECCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
KNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEE
EIFCSPSIQGARLKEDKRVPMAYWLYGLHLSVEYDRHAEDILGQLKPWNVLNIQEESILS
EEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHCCCCCCEECCCHHHHHH
YFLRHNSRFDMMKLTGQWDLLHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAK
HHHHCCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDKHLLQNNGKRYLSGYLGTEL
CCCCEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQNIESLQSLI
CCCCHHHHHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHCCCCEEECCCCHHHHHHHH
LFANQYHLPVTIRGNGLSQGGQSLPVPGGLTISMQSFNKPLDLSEDLIWVEANTSWKNLL
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEECCCHHHHHH
EKSLLKNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVINAYVSALEVVDGLGRKQIVE
HHHHHHCCCCEEEEECCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
KNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEE
EIFCSPSIQGARLKEDKRVPMAYWLYGLHLSVEYDRHAEDILGQLKPWNVLNIQEESILS
EEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHCCCCCCEECCCHHHHHH
YFLRHNSRFDMMKLTGQWDLLHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAK
HHHHCCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDKHLLQNNGKRYLSGYLGTEL
CCCCEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8169198 [H]