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The map label for this gene is ycaC [C]

Identifier: 148360448

GI number: 148360448

Start: 1086923

End: 1087468

Strand: Direct

Name: ycaC [C]

Synonym: LPC_2387

Alternate gene names: 148360448

Gene position: 1086923-1087468 (Clockwise)

Preceding gene: 148360449

Following gene: 148360447

Centisome position: 30.39

GC content: 37.18

Gene sequence:

>546_bases
ATGTTACTAAATAGAGCGGATTCTCTTTTGGTCTTGATTGATGTACAGGAAAAACTAACCCCGGCAATATTAAATCTCGA
TCTTTTTTTAGCTCGATGTGAATGGTTACTAAAATTAGCCAGAAAACTGGACGTGCCTGTTCTAGCTAGTGAACAATACC
CTAAAGGTTTAGGTCGAACCGTTTCTCCTTTAAGCTCTTATATCAATCAAGAAGAATGCATTGAAAAAATTCATTTCTCA
TGCATGCAAGAACCACAATATATTAACCTCCTGAAAGGATATAATAAAAACCAGCTTATTCTTATCGGAATTGAGGCTCA
TGTATGTGTGCTTCAAACGGCCATAGAAATGAAGGGCTATGGATTCGAGGTCTTTGTTGTTGTAGATGGTGTGAGCAGTC
GCTCTGAGTTTGATTTAAAATACGGTCTAAAAAGGATGAAACAGAATGGGATCCATTTGATAACCGCTGAAATGGTACTG
TTCGAGTGGTTAAAACAAGCAGGTACGCCAGAATTTAAAGCGATTAGCAAAGAATTTTTACAATAG

Upstream 100 bases:

>100_bases
CTATTATTTCCCCGGAAAAGAATTATGCCTCAATCCGGGGTTCACTCACTTTTCTTAATGCTATATGATATAGATCAATA
AATAGAATGAGGCTATCAGG

Downstream 100 bases:

>100_bases
ACCATTTGCATGGCCTGATTATTTCCTTTTATTGCTGTGTTGCAAACGTTTCTGCGGTACTCATGTACTGTATGTAAGCT
TCCTTCCTCAAAGCGGTTTT

Product: YcaC related amidohydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Domain-Containing; Hydrolase; Isochorismatase Family Hydrolase; YcaC-Related Amidohydrolase; Amidohydrolase; Hydrolase Isochorismatase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase-Related Amidase; Isochorismatase; Nicotinamidase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLLNRADSLLVLIDVQEKLTPAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKGYNKNQLILIGIEAHVCVLQTAIEMKGYGFEVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ

Sequences:

>Translated_181_residues
MLLNRADSLLVLIDVQEKLTPAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKGYNKNQLILIGIEAHVCVLQTAIEMKGYGFEVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ
>Mature_181_residues
MLLNRADSLLVLIDVQEKLTPAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKGYNKNQLILIGIEAHVCVLQTAIEMKGYGFEVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=173, Percent_Identity=35.2601156069364, Blast_Score=107, Evalue=5e-24,
Organism=Homo sapiens, GI209969695, Length=174, Percent_Identity=36.2068965517241, Blast_Score=100, Evalue=7e-22,
Organism=Homo sapiens, GI13376007, Length=190, Percent_Identity=33.1578947368421, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17540156, Length=179, Percent_Identity=38.5474860335196, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI19922924, Length=178, Percent_Identity=31.4606741573034, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357489, Length=175, Percent_Identity=34.2857142857143, Blast_Score=96, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20635; Mature: 20635

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNRADSLLVLIDVQEKLTPAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRT
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
VSPLSSYINQEECIEKIHFSCMQEPQYINLLKGYNKNQLILIGIEAHVCVLQTAIEMKGY
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCC
GFEVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVLFEWLKQAGTPEFKAISKEFL
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHC
Q
C
>Mature Secondary Structure
MLLNRADSLLVLIDVQEKLTPAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRT
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
VSPLSSYINQEECIEKIHFSCMQEPQYINLLKGYNKNQLILIGIEAHVCVLQTAIEMKGY
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCC
GFEVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVLFEWLKQAGTPEFKAISKEFL
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA