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The map label for this gene is pilO

Identifier: 148360422

GI number: 148360422

Start: 1110971

End: 1111570

Strand: Direct

Name: pilO

Synonym: LPC_2361

Alternate gene names: NA

Gene position: 1110971-1111570 (Clockwise)

Preceding gene: 148360423

Following gene: 148360421

Centisome position: 31.06

GC content: 39.5

Gene sequence:

>600_bases
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATCGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAGACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATACCGGGCACAATGA

Upstream 100 bases:

>100_bases
CTAACTGAAATTAAAAAAAATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGCTTTGTGCTTAAACCGAA
ATATTAGGCTGATAAAAATC

Downstream 100 bases:

>100_bases
TAATTAAAAATAACCAGACTCTTATATTAGGCTTTTTCGGAAATTCTCTGTGTACTTTCCTCACCTCAGAGAATTTCCGA
AAAAGCCTATTGACGGCGTT

Product: type IV pilus biogenesis protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Type IV Pilus Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Pilus Iv Assembly Membrane Protein Pilo; Type IV Pilus Assembly Membrane Transmembrane Protein; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Fimbrial Assembly Protein PilO

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ

Sequences:

>Translated_199_residues
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
>Mature_199_residues
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22524; Mature: 22524

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALK
CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
TEFEKKQHQAANLQAYRNQLQLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEE
FAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNRIVTLHEFSVEGVSSGDGKTV
ECCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
SQDELVMAITAKIYRYRAQ
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALK
CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
TEFEKKQHQAANLQAYRNQLQLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEE
FAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNRIVTLHEFSVEGVSSGDGKTV
ECCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
SQDELVMAITAKIYRYRAQ
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA