Click here to switch to the map view.

The map label for this gene is 148360155

Identifier: 148360155

GI number: 148360155

Start: 2885548

End: 2886852

Strand: Reverse

Name: 148360155

Synonym: LPC_2086

Alternate gene names: NA

Gene position: 2886852-2885548 (Counterclockwise)

Preceding gene: 148360153

Following gene: 148360156

Centisome position: 80.72

GC content: 41.3

Gene sequence:

>1305_bases
ATGCCGAATTCAAGTGTACAAATCTGGTTGCAAAGACAAATTGCTTTAAGAACTTTTCCTCCGAATAGAGAAGACTGGTT
TGTCAAAAATGGTTTCGGTCATTCAGAGATGTCACTTGAAGAACGTTTTGCCTGTTTTGTAGAGGCAATACGCCAAGTGG
ATTCTCCCTACCATGAACAATTATCCGGTATAGATTTTCAGCGCTTTGAGATCGAGGTGACGTTAGCCAACCAAAAAACC
TGTATGACCGAGGTGATAGGGTTTCAGAATAATTCCAACCAATCAAGCTCCTTACTAAATGAGAAGGTCAAAGCTGTTGG
AAAGGGGAAACATGTGATTTATTTCACTGGAATAGGAACACAATATCAAGATTGCCTGATTGATATAGCAAAAGCTGTTC
AAATAACGGGGGCGCATTATTACGCTTTTGAATACCCGGGCATGAGAAAACTGGGCGGTGAAGTGTTAGAAGTCAATGAT
ATGGTTAACACTGGAATAGCGCTGGCTAATACCTTGCTTGAAAAAGGCATATCAATTGATGATATCCTTTTTCAAGGCGA
CTCCTTTGGTGCTGCGGTGGCAAAAAAAGTCAGTGATCAATTCAAACTGCAATCAAATGTAACAGTAAGATGCATTCTGA
ATAATACCTTTTCCACTTTTCAAGCTGCTGTAGAAGGAAATCTGGGTGCGTTCTCTACTCTGCGTTATACAGTTCGTCCT
CTGCTTCGTTACACGGGTTGGGATATTCGTCCAGGAGAGGGCTATGGCCAGGACACCCCTTACCAAATTCATATCAATCA
TACAGGCGATCTTACCTTGGGGGCAGGACATGCAACGCTTGCAGAAAGTGTTGAGTCCAATTCTCAACTTGAACATTTCG
TTGATCCATGCCCTGAAGAGTATCGTATTAAAAGAGATATCTATAAACAGTGGCATTGGGCCTCGTTAAGTGAACAAGGA
ATAACATTTCTCGAGACCAAATATGGCAGAAACAGTGACGGCCAATTGGACACGCATCTCGCCGATTTGTATTTGCTAAA
GTATGATACGGGTCTTGGGGTTTATGAATCATTTATTTGTAAATATCTCGAAGACAGTAATGACTATATCGCCAATCATC
CGCAAAAGCTCTCGCTTGACGAATTACCAAGTCCTCTTGAGTCCGAAACAGTTTCATTGAGACAATTGATTGTCTCTGTG
TTACCATCAAGACCTAGTATAGCCGGTTTTTTTGGTCGTCCTATACCAGTCAAGGATGAAGTGGATTCAGAGAATCAAGC
TCAGAAATCAATAGAGTTAAAGTAA

Upstream 100 bases:

>100_bases
GGTGCTGAACATAAGAATTATCTCTAATAAAGATGCGCAAAGAAATGTTGACTCATTAGCAAAATGTATGCACACTTATT
GATCAAAAAAAGGGGGGACT

Downstream 100 bases:

>100_bases
GCTGTATTACTACCTGTGAAACAAAAGCAACAGCTTGAACATGGATAAAAAAATTATTGCGGCAGCCTCTTTTGGCACCT
TGTTTGAAATGTACGACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPNSSVQIWLQRQIALRTFPPNREDWFVKNGFGHSEMSLEERFACFVEAIRQVDSPYHEQLSGIDFQRFEIEVTLANQKT
CMTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGEGYGQDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
ITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLDELPSPLESETVSLRQLIVSV
LPSRPSIAGFFGRPIPVKDEVDSENQAQKSIELK

Sequences:

>Translated_434_residues
MPNSSVQIWLQRQIALRTFPPNREDWFVKNGFGHSEMSLEERFACFVEAIRQVDSPYHEQLSGIDFQRFEIEVTLANQKT
CMTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGEGYGQDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
ITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLDELPSPLESETVSLRQLIVSV
LPSRPSIAGFFGRPIPVKDEVDSENQAQKSIELK
>Mature_433_residues
PNSSVQIWLQRQIALRTFPPNREDWFVKNGFGHSEMSLEERFACFVEAIRQVDSPYHEQLSGIDFQRFEIEVTLANQKTC
MTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDM
VNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRPL
LRYTGWDIRPGEGYGQDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQGI
TFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLDELPSPLESETVSLRQLIVSVL
PSRPSIAGFFGRPIPVKDEVDSENQAQKSIELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48794; Mature: 48663

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSSVQIWLQRQIALRTFPPNREDWFVKNGFGHSEMSLEERFACFVEAIRQVDSPYHEQ
CCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
LSGIDFQRFEIEVTLANQKTCMTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIALANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGEGYGQDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIANHPQKLSLDELPSPLESETVSLRQLIVSVLPSRPSIAGFFGRPIPVKDE
HHHHCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCC
VDSENQAQKSIELK
CCCCHHHHHCCCCC
>Mature Secondary Structure 
PNSSVQIWLQRQIALRTFPPNREDWFVKNGFGHSEMSLEERFACFVEAIRQVDSPYHEQ
CCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
LSGIDFQRFEIEVTLANQKTCMTEVIGFQNNSNQSSSLLNEKVKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIALANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGEGYGQDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIANHPQKLSLDELPSPLESETVSLRQLIVSVLPSRPSIAGFFGRPIPVKDE
HHHHCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCC
VDSENQAQKSIELK
CCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA