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The map label for this gene is ynjA [H]

Identifier: 148360064

GI number: 148360064

Start: 2973692

End: 2974249

Strand: Reverse

Name: ynjA [H]

Synonym: LPC_1995

Alternate gene names: 148360064

Gene position: 2974249-2973692 (Counterclockwise)

Preceding gene: 148360061

Following gene: 148360066

Centisome position: 83.16

GC content: 36.92

Gene sequence:

>558_bases
ATGAGAATTTTGGAAAAAAATATCAAGAAGACTCCCTGGTATTTAAAACCATTCTTCTGGAATCAAAAAAGAAAATACGG
CCAAATACTCGAACCCGCTTTGATTTGGGCAAGAATTCCCAGGTTATTTTTGGCAGTTTCTGCTATGTATGGCGTGATAG
ACAGAAAAAAATCACCACTTTCCCCAATATTACGCTCTCTCATCACTGTCAGGGTTTCTCAAATTAACTGGTGTGAGTTT
TGTGTTGATATTAATTCAGCAACTTTAATTAAAAGGGCTGGAAGTGAAGCACATTATAAACAACTGGCGAAATGGAGGAG
TTCCTCATTATTTTCACCAGAAGAAAAAGCGGCATTGGATTATGCTGAAAAAGTAACTTATTCTGATCAACGTCCTGATG
ATGAGTGTTTCAATCAATTGAAATTGTATTATTCTGAACAGGAAATCATTGAATTGACAGCACTGATTGCATTTCAGAAT
ATGTCCAGTAAATTTAATAGTGCCCTTGGCGTTGAAGCACAAGGATTTTGTTCGAGGCAACTGACTGGCAAAAGCTGA

Upstream 100 bases:

>100_bases
CTAATTCTTTTATTTTTCCAGGGTTACTGGTTGCCAAAATAATTTCTTTCATTCTTATTCCATGTTATTAATTCAGTATT
CATAAAAAGGATAATTATGC

Downstream 100 bases:

>100_bases
ATAGTCCTGCCAGTCAGTACTTGCAATTACATAGAGATGCTTTTACCTATTGTATTATCGTTGAATCGATCATGCCTTAG
TTGTTGTTCATCCGTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVSAMYGVIDRKKSPLSPILRSLITVRVSQINWCEF
CVDINSATLIKRAGSEAHYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS

Sequences:

>Translated_185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVSAMYGVIDRKKSPLSPILRSLITVRVSQINWCEF
CVDINSATLIKRAGSEAHYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS
>Mature_185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVSAMYGVIDRKKSPLSPILRSLITVRVSQINWCEF
CVDINSATLIKRAGSEAHYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=170, Percent_Identity=44.1176470588235, Blast_Score=162, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 21399; Mature: 21399

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVSAMYGVIDRKKSPL
CCCCHHHCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SPILRSLITVRVSQINWCEFCVDINSATLIKRAGSEAHYKQLAKWRSSSLFSPEEKAALD
HHHHHHHHHHHHHHCHHHHHHEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH
YAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQNMSSKFNSALGVEAQGFCSRQ
HHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
LTGKS
CCCCC
>Mature Secondary Structure
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVSAMYGVIDRKKSPL
CCCCHHHCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SPILRSLITVRVSQINWCEFCVDINSATLIKRAGSEAHYKQLAKWRSSSLFSPEEKAALD
HHHHHHHHHHHHHHCHHHHHHEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH
YAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQNMSSKFNSALGVEAQGFCSRQ
HHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
LTGKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]