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The map label for this gene is dnaJ [H]

Identifier: 148359972

GI number: 148359972

Start: 3067180

End: 3068349

Strand: Direct

Name: dnaJ [H]

Synonym: LPC_1902

Alternate gene names: 148359972

Gene position: 3067180-3068349 (Clockwise)

Preceding gene: 148359974

Following gene: 148359971

Centisome position: 85.76

GC content: 33.59

Gene sequence:

>1170_bases
ATGTCTTTATTATCTCCTAAAAAAGCTATCGCCGTACTTTTCATACACAGAGGTAATATAGGCCAACAATTTTCTCTATT
CGATGCAGATACCCCTCACTTTATTTCTAAAGATAACCCCACTATTATTGAGGCGCTAAAAAGTGATTCTTTTGAAGCCA
AAAGATTTATAAACTCTAGACTTGGTGCTTTATTAAGCCCTTTAGAGTTTGCTAAAATCTTATTAACTCACCAAGATAAT
AGCAGTTTTTTCATTCAAACTTTAGCTCGGCATGAGTATGCTTTTAGTGAAGAAAGTTTAAAAGATCCTCAAGTTAAAGA
GATCTATCAGCAACTATTAATCAAAGCCACTGATCCAGTTAACGCAAGGGCTTACAAAAATTATTTTATTAAACATCCTA
ATCATATTGAACGATTATTTAATTTCTTAATGGCCACTGAAAGTGCAAATGCAGCAATTGCATTTATGAATTCTTATGAA
AACATGTCATTATTTTCTGTCAAGCAAATCACAGACTTACTTTTAAACCATAGAACACATCTAAAGCTACAAAACGTACC
TCCATTTACCCCTCATAATCCTCAACTTATTGCTTTAGATAATCCTATGCTTATTAACGCGTTAGAAAACGATCCTGGCA
TAGCTATCCAATTTATAAATTCGAGATTGATAAATTTATTTACACCTTTCACAGCTGCAAAAATTATGCTTGCCCATAAA
GATAATGATCGTTTCTATGATCAAACGCGGCCACGCCATGCTTCACTTTTTACTTCTCAAAACTTGAATGATCCCAGGAT
TAAAGAAATTTATGATCAATATTTTCATAATCGAAATCAGAGAAAAAATCGATTTTTTGCACAACAACCCCAAGTTAACG
AGACTGAGGAATATTTCAGATTCGCGAATAGAGATGAAATAAAATTTAATCCTTACAAAGTATTAGGCGTTAACGAAGAT
GCAAGCTTAGTAGAGATAAAAAAAGCCTATAAAAAGTTAGCCATGGCTTGGCATCCTGATAGAATACAAGCAGGTGAAAA
TATAGAAGCGCGAACAGAATGTTTTAAGAAACTTGGGATAGCCTATAATATTTTAATTGATCCTGCCAAACGACAGGAGT
ATGACAATAGGCCTCAAAACAGATTCGGAAGGCATAATCCCATGCAATAA

Upstream 100 bases:

>100_bases
AAAATACGAGGTTTTTAATTTTTAAAGATAGTCCTATATTTTTGAAGCAGCAAAGCAAAACTATGATGTCGCTAAAATAC
TCCTGAGTTCAACCAAAGTA

Downstream 100 bases:

>100_bases
GGGCTTCGTTATTGGGTTAGCAATAGCGATTGCATCCAAAAAGGGTGATACTATTCAACCAGGTGGTGCTCAATTAGCTA
ACCAACTTAGCTTTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSLLSPKKAIAVLFIHRGNIGQQFSLFDADTPHFISKDNPTIIEALKSDSFEAKRFINSRLGALLSPLEFAKILLTHQDN
SSFFIQTLARHEYAFSEESLKDPQVKEIYQQLLIKATDPVNARAYKNYFIKHPNHIERLFNFLMATESANAAIAFMNSYE
NMSLFSVKQITDLLLNHRTHLKLQNVPPFTPHNPQLIALDNPMLINALENDPGIAIQFINSRLINLFTPFTAAKIMLAHK
DNDRFYDQTRPRHASLFTSQNLNDPRIKEIYDQYFHNRNQRKNRFFAQQPQVNETEEYFRFANRDEIKFNPYKVLGVNED
ASLVEIKKAYKKLAMAWHPDRIQAGENIEARTECFKKLGIAYNILIDPAKRQEYDNRPQNRFGRHNPMQ

Sequences:

>Translated_389_residues
MSLLSPKKAIAVLFIHRGNIGQQFSLFDADTPHFISKDNPTIIEALKSDSFEAKRFINSRLGALLSPLEFAKILLTHQDN
SSFFIQTLARHEYAFSEESLKDPQVKEIYQQLLIKATDPVNARAYKNYFIKHPNHIERLFNFLMATESANAAIAFMNSYE
NMSLFSVKQITDLLLNHRTHLKLQNVPPFTPHNPQLIALDNPMLINALENDPGIAIQFINSRLINLFTPFTAAKIMLAHK
DNDRFYDQTRPRHASLFTSQNLNDPRIKEIYDQYFHNRNQRKNRFFAQQPQVNETEEYFRFANRDEIKFNPYKVLGVNED
ASLVEIKKAYKKLAMAWHPDRIQAGENIEARTECFKKLGIAYNILIDPAKRQEYDNRPQNRFGRHNPMQ
>Mature_388_residues
SLLSPKKAIAVLFIHRGNIGQQFSLFDADTPHFISKDNPTIIEALKSDSFEAKRFINSRLGALLSPLEFAKILLTHQDNS
SFFIQTLARHEYAFSEESLKDPQVKEIYQQLLIKATDPVNARAYKNYFIKHPNHIERLFNFLMATESANAAIAFMNSYEN
MSLFSVKQITDLLLNHRTHLKLQNVPPFTPHNPQLIALDNPMLINALENDPGIAIQFINSRLINLFTPFTAAKIMLAHKD
NDRFYDQTRPRHASLFTSQNLNDPRIKEIYDQYFHNRNQRKNRFFAQQPQVNETEEYFRFANRDEIKFNPYKVLGVNEDA
SLVEIKKAYKKLAMAWHPDRIQAGENIEARTECFKKLGIAYNILIDPAKRQEYDNRPQNRFGRHNPMQ

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 45287; Mature: 45156

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSPKKAIAVLFIHRGNIGQQFSLFDADTPHFISKDNPTIIEALKSDSFEAKRFINSR
CCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
LGALLSPLEFAKILLTHQDNSSFFIQTLARHEYAFSEESLKDPQVKEIYQQLLIKATDPV
HHHHHCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCC
NARAYKNYFIKHPNHIERLFNFLMATESANAAIAFMNSYENMSLFSVKQITDLLLNHRTH
CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
LKLQNVPPFTPHNPQLIALDNPMLINALENDPGIAIQFINSRLINLFTPFTAAKIMLAHK
EEECCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHCCHHHHEEEEEEC
DNDRFYDQTRPRHASLFTSQNLNDPRIKEIYDQYFHNRNQRKNRFFAQQPQVNETEEYFR
CCCCCHHCCCCCHHHEEECCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH
FANRDEIKFNPYKVLGVNEDASLVEIKKAYKKLAMAWHPDRIQAGENIEARTECFKKLGI
HCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCC
AYNILIDPAKRQEYDNRPQNRFGRHNPMQ
EEEEEECCHHHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SLLSPKKAIAVLFIHRGNIGQQFSLFDADTPHFISKDNPTIIEALKSDSFEAKRFINSR
CCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
LGALLSPLEFAKILLTHQDNSSFFIQTLARHEYAFSEESLKDPQVKEIYQQLLIKATDPV
HHHHHCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCC
NARAYKNYFIKHPNHIERLFNFLMATESANAAIAFMNSYENMSLFSVKQITDLLLNHRTH
CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
LKLQNVPPFTPHNPQLIALDNPMLINALENDPGIAIQFINSRLINLFTPFTAAKIMLAHK
EEECCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHCCHHHHEEEEEEC
DNDRFYDQTRPRHASLFTSQNLNDPRIKEIYDQYFHNRNQRKNRFFAQQPQVNETEEYFR
CCCCCHHCCCCCHHHEEECCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH
FANRDEIKFNPYKVLGVNEDASLVEIKKAYKKLAMAWHPDRIQAGENIEARTECFKKLGI
HCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCC
AYNILIDPAKRQEYDNRPQNRFGRHNPMQ
EEEEEECCHHHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA