Click here to switch to the map view.

The map label for this gene is 148359837

Identifier: 148359837

GI number: 148359837

Start: 2715046

End: 2716449

Strand: Reverse

Name: 148359837

Synonym: LPC_1765

Alternate gene names: NA

Gene position: 2716449-2715046 (Counterclockwise)

Preceding gene: 148359838

Following gene: 148359835

Centisome position: 75.95

GC content: 38.96

Gene sequence:

>1404_bases
ATGAGTATTGCAAACGATATTATCAGTCATAGAATGCCTGATTTTGATGCTTATCTGCGTGCAGGGGAATCTTTGGATGA
TATCGATGAATATGGTTTTACTCCCCTCATAGAGTGTGCCATTACACGACAAATTAAAATAGCAGAGCAGTTAATTGCTC
GAAAAGTGGATATCAACAAGCCAGACGTCACAGGACGCACTCCATTACATTGGGCAGTGGATAATAATGATTTGGATATG
ACCAAACTCTTATTAACCTACGGCGCTGATCCTAATGCCTACACTCGTAATGGTCTTTGTGTGTTGGTTTATCCGGTTTT
GCGTGGCCAAGATGCAATAAAGCAGTTGTTATATCATCATGGTGCGAAGCTTGATTTTGCTCTTGATTTTATTAATGCAA
AATTGATTGGTCATCGATTTGAATTGCAAGGTGATGTGGATATTGTCAATGCGAAAGGTGAATTCATCGAACTTGATTAT
GAAGGGTTTATTTTGGAATTCACTGTTGCTGTTGTAAAAGACTCCTTGCGGAGATTTATCAGTAGTTATTCGACTCGGCA
TTTAAGGGATTATTTTCCATATATTCATAATATTATGGATGCTTTTACTGATGCGGCAGAACTGTTGCAGTATCAACATC
ATCCCAGACTTGGCGAACAGCATTTCAAACGTATCGCTGCTTTGTTAAAAGCCCCTATGCTGATTCTTCCTGCGGCGAGT
CGTGGCCATGCCTTATGCTTTGTCCGTTATCACCAGTGGTGGGCAAAAATTGACAGGGGTGAAAACAGCTTACAAGAAGG
AAGTGTTAATATTTACCGAATAACCAGGCCAGAGGCACTGACAATCAATTTTATCCATGATTTTTTATATAAAAAACAAA
ACAGACGATATTATCATCAAATGATTAATCAACAATTGGGGCTGCTTCCTTTTGCTCAAATGCCAATTAGTTCTCAAATT
AGTGGAAATTGTTCGTGGGCTAATGTGCAAGCCGTTGTACCAGTCGCGTATTCTATGCAAGAGCTGACCAGCGTAGAAAA
TTTTAAACCTGATGTGGCCTTATCACTGTATGATGAGTGGGTCGAGTGGGATAAAGACAGGGCTCTTGATGAATGCATAC
AAAGATTTTATTTAGCCAGTCCTGAACGTAAGGCAAGTATTGCTGCAATCTTGGGAGGAATTTTGTTTCAGGCTTGTGAT
CACGCTAACAAGCGTCATCTGGAAAGAGCGGAGAAAATTCTTAATATTCTGATTTTAGACGAATATTATTATGTTTTGAG
CAGTTATCTGGAAGAATACTGTATTAAACGATTAACCCGTAAAGGAAATAATTTATTGAAAATTCTGGATGATTGTGGGA
TTAATCCTAATATTGGCGTCAATCCTGTTGCGACAGGCCTATAA

Upstream 100 bases:

>100_bases
GGAGTTTGATAATGAGAGAAGAGAACAGGATAAAGAAAAACAATTACGCTTAGGCAATATGCCAAAATTTACTACAGCAC
CTACCCCCCGGGGGCCCTAA

Downstream 100 bases:

>100_bases
ACAGAAATTTTCCTTTAATAATCTAATAGTTGTTGATTTTGTGAAATCAGCGTCTAACCTGTAAGACAAGCAATTTCTTT
TATTCTCGTGTCAATTTGTC

Product: ankyrin repeat domain-containing protein

Products: NA

Alternate protein names: Ankyrin-Like Protein; Substrate Of Dot/Icm Secretion System; Ankyrin Repeat Protein

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSIANDIISHRMPDFDAYLRAGESLDDIDEYGFTPLIECAITRQIKIAEQLIARKVDINKPDVTGRTPLHWAVDNNDLDM
TKLLLTYGADPNAYTRNGLCVLVYPVLRGQDAIKQLLYHHGAKLDFALDFINAKLIGHRFELQGDVDIVNAKGEFIELDY
EGFILEFTVAVVKDSLRRFISSYSTRHLRDYFPYIHNIMDAFTDAAELLQYQHHPRLGEQHFKRIAALLKAPMLILPAAS
RGHALCFVRYHQWWAKIDRGENSLQEGSVNIYRITRPEALTINFIHDFLYKKQNRRYYHQMINQQLGLLPFAQMPISSQI
SGNCSWANVQAVVPVAYSMQELTSVENFKPDVALSLYDEWVEWDKDRALDECIQRFYLASPERKASIAAILGGILFQACD
HANKRHLERAEKILNILILDEYYYVLSSYLEEYCIKRLTRKGNNLLKILDDCGINPNIGVNPVATGL

Sequences:

>Translated_467_residues
MSIANDIISHRMPDFDAYLRAGESLDDIDEYGFTPLIECAITRQIKIAEQLIARKVDINKPDVTGRTPLHWAVDNNDLDM
TKLLLTYGADPNAYTRNGLCVLVYPVLRGQDAIKQLLYHHGAKLDFALDFINAKLIGHRFELQGDVDIVNAKGEFIELDY
EGFILEFTVAVVKDSLRRFISSYSTRHLRDYFPYIHNIMDAFTDAAELLQYQHHPRLGEQHFKRIAALLKAPMLILPAAS
RGHALCFVRYHQWWAKIDRGENSLQEGSVNIYRITRPEALTINFIHDFLYKKQNRRYYHQMINQQLGLLPFAQMPISSQI
SGNCSWANVQAVVPVAYSMQELTSVENFKPDVALSLYDEWVEWDKDRALDECIQRFYLASPERKASIAAILGGILFQACD
HANKRHLERAEKILNILILDEYYYVLSSYLEEYCIKRLTRKGNNLLKILDDCGINPNIGVNPVATGL
>Mature_466_residues
SIANDIISHRMPDFDAYLRAGESLDDIDEYGFTPLIECAITRQIKIAEQLIARKVDINKPDVTGRTPLHWAVDNNDLDMT
KLLLTYGADPNAYTRNGLCVLVYPVLRGQDAIKQLLYHHGAKLDFALDFINAKLIGHRFELQGDVDIVNAKGEFIELDYE
GFILEFTVAVVKDSLRRFISSYSTRHLRDYFPYIHNIMDAFTDAAELLQYQHHPRLGEQHFKRIAALLKAPMLILPAASR
GHALCFVRYHQWWAKIDRGENSLQEGSVNIYRITRPEALTINFIHDFLYKKQNRRYYHQMINQQLGLLPFAQMPISSQIS
GNCSWANVQAVVPVAYSMQELTSVENFKPDVALSLYDEWVEWDKDRALDECIQRFYLASPERKASIAAILGGILFQACDH
ANKRHLERAEKILNILILDEYYYVLSSYLEEYCIKRLTRKGNNLLKILDDCGINPNIGVNPVATGL

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53603; Mature: 53472

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIANDIISHRMPDFDAYLRAGESLDDIDEYGFTPLIECAITRQIKIAEQLIARKVDINK
CCHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDVTGRTPLHWAVDNNDLDMTKLLLTYGADPNAYTRNGLCVLVYPVLRGQDAIKQLLYHH
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHC
GAKLDFALDFINAKLIGHRFELQGDVDIVNAKGEFIELDYEGFILEFTVAVVKDSLRRFI
CCCEEEHHHHHHHHHHCCEEEECCCEEEEECCCCEEEECCCCEEHHHHHHHHHHHHHHHH
SSYSTRHLRDYFPYIHNIMDAFTDAAELLQYQHHPRLGEQHFKRIAALLKAPMLILPAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCC
RGHALCFVRYHQWWAKIDRGENSLQEGSVNIYRITRPEALTINFIHDFLYKKQNRRYYHQ
CCCEEEEEHHHHHHHHHHCCCCCHHCCCEEEEEECCCCEEEHHHHHHHHHHHHCHHHHHH
MINQQLGLLPFAQMPISSQISGNCSWANVQAVVPVAYSMQELTSVENFKPDVALSLYDEW
HHHHHCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VEWDKDRALDECIQRFYLASPERKASIAAILGGILFQACDHANKRHLERAEKILNILILD
HHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EYYYVLSSYLEEYCIKRLTRKGNNLLKILDDCGINPNIGVNPVATGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIANDIISHRMPDFDAYLRAGESLDDIDEYGFTPLIECAITRQIKIAEQLIARKVDINK
CHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDVTGRTPLHWAVDNNDLDMTKLLLTYGADPNAYTRNGLCVLVYPVLRGQDAIKQLLYHH
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHC
GAKLDFALDFINAKLIGHRFELQGDVDIVNAKGEFIELDYEGFILEFTVAVVKDSLRRFI
CCCEEEHHHHHHHHHHCCEEEECCCEEEEECCCCEEEECCCCEEHHHHHHHHHHHHHHHH
SSYSTRHLRDYFPYIHNIMDAFTDAAELLQYQHHPRLGEQHFKRIAALLKAPMLILPAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCC
RGHALCFVRYHQWWAKIDRGENSLQEGSVNIYRITRPEALTINFIHDFLYKKQNRRYYHQ
CCCEEEEEHHHHHHHHHHCCCCCHHCCCEEEEEECCCCEEEHHHHHHHHHHHHCHHHHHH
MINQQLGLLPFAQMPISSQISGNCSWANVQAVVPVAYSMQELTSVENFKPDVALSLYDEW
HHHHHCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VEWDKDRALDECIQRFYLASPERKASIAAILGGILFQACDHANKRHLERAEKILNILILD
HHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EYYYVLSSYLEEYCIKRLTRKGNNLLKILDDCGINPNIGVNPVATGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA