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The map label for this gene is yrbE [C]

Identifier: 148359621

GI number: 148359621

Start: 2405705

End: 2406829

Strand: Reverse

Name: yrbE [C]

Synonym: LPC_1533

Alternate gene names: 148359621

Gene position: 2406829-2405705 (Counterclockwise)

Preceding gene: 148359624

Following gene: 148359620

Centisome position: 67.3

GC content: 37.78

Gene sequence:

>1125_bases
ATGGAACAGACTAGCGCACAGATTGTTTTCGAGCAAAAGAATGCAACATACCAGTGTTGTGGTTCCTGGTCTGTTTTGAC
CCTTGAGGGATTACCTAAAAAATTTATTACCGGCCCATTGCCTGATTCACAGCAAATAACTATAAATGGTGAAAAAATCA
GTGTTTTTGATAGTGCCGGAGCTCTGGCATTAAAGAAATGCATAGATGAGCTTAAAAAAAGAAATAACCAGGTTGAATTA
GTCAATTTTTCCGATAGCCAACAGCAAATGCTGGAGCTCATTGAGTCCAAACAAGATATTCTTTCCTATCAATTACCTAT
TGTTTCCAAAGAAGGTGTTCTTTATCAGATTGGTAAAGAGTCAGAAAATAAATTGCATCAGGTTGATGGTTTGATTATTT
TGATAGGAGATTTAAGCACAAGGCTTTTCGAAGCGTTTGCATATTGGCGGCGATTTCATTTGCCCAGTATTGTGTCTGTT
ATTGATTCTGCCGGGCTAAAAGCGTTACCTATCATTGGATTATTGTCTTTTTTGATAGGGGTCGTTTTAGCTTATCAAAT
GGGTTTGCAATTAGAAACTTATGGTGCCAATATTTTTATTGCCTATTTATCTGGCATGGCAATTTTTCGGGAATTTGGAC
CTTTAATTACAGCAATCATTGTAGCGGGGCGCACCAGCTCATCATTCACAGCTCAAATTGGCAGCATGAAGATTAATGAA
GAGGTAGATGCCATCTTGACCATGGGACTTTCTCCCACTGAATTATTAGTTTTACCCAAAGTCTTGGGTTTATTAATAGT
GTTTCCTTTATTAATTTTTTGGGCAGATGTCTTTAGCATTTGGGGGGCAATGATCATGTCCAAAAATATGTTAAACATTG
GTTTCGAAGATTTTTTAACTCGCTTGAGAGATTCCGTAGGACTTAACCAAATGATGCTGGGTTTGTATAAAGCCCCTGCC
TTCTCGATATTAATTGCTTTAGTGGGTTGTTTTCAGGGGTTTAGAGTAGAATCAAGTGCTGATAGTATAGGAAGCCAAAC
GACCAAAAGTGTTGTGCAAGCTTTATTTTTAATTATTATTGCTGACGCTGCTTTCTCCATAGCTTATAGCTGGATGGGTT
TGTAA

Upstream 100 bases:

>100_bases
AGAGCACTATCTATATTATTATGATACCATGAATCGTAAGTTTTTGCGGTCTTGTGGTATTTTGTATTATTCTAGGAAAA
TTCAATAAAAAGAAATAAAT

Downstream 100 bases:

>100_bases
ATGAGTGAACCAGTTATTGAAATCAAGGGAATGAAAAATTGTCTTGGCGGTCAATGGGTGCACACCGATGTTAATCTCAC
CGTAGAAAGGGGAGAAATCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLEGLPKKFITGPLPDSQQITINGEKISVFDSAGALALKKCIDELKKRNNQVEL
VNFSDSQQQMLELIESKQDILSYQLPIVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLTRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL

Sequences:

>Translated_374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLEGLPKKFITGPLPDSQQITINGEKISVFDSAGALALKKCIDELKKRNNQVEL
VNFSDSQQQMLELIESKQDILSYQLPIVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLTRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL
>Mature_374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLEGLPKKFITGPLPDSQQITINGEKISVFDSAGALALKKCIDELKKRNNQVEL
VNFSDSQQQMLELIESKQDILSYQLPIVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLTRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=205, Percent_Identity=27.8048780487805, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41125; Mature: 41125

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTSAQIVFEQKNATYQCCGSWSVLTLEGLPKKFITGPLPDSQQITINGEKISVFDSAG
CCCCCCEEEEECCCCCEEECCCCCEEEECCCCHHHCCCCCCCCCEEEEECCEEEEECCCC
ALALKKCIDELKKRNNQVELVNFSDSQQQMLELIESKQDILSYQLPIVSKEGVLYQIGKE
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCC
SENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSFLIG
CHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECH
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHH
RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII
HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCHHHHCHHHHHHHHHHHHHHHH
ADAAFSIAYSWMGL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEQTSAQIVFEQKNATYQCCGSWSVLTLEGLPKKFITGPLPDSQQITINGEKISVFDSAG
CCCCCCEEEEECCCCCEEECCCCCEEEECCCCHHHCCCCCCCCCEEEEECCEEEEECCCC
ALALKKCIDELKKRNNQVELVNFSDSQQQMLELIESKQDILSYQLPIVSKEGVLYQIGKE
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCC
SENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSFLIG
CHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECH
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHH
RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII
HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCHHHHCHHHHHHHHHHHHHHHH
ADAAFSIAYSWMGL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA