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The map label for this gene is 148359550

Identifier: 148359550

GI number: 148359550

Start: 2331156

End: 2332598

Strand: Direct

Name: 148359550

Synonym: LPC_1462

Alternate gene names: NA

Gene position: 2331156-2332598 (Clockwise)

Preceding gene: 148359549

Following gene: 148359551

Centisome position: 65.18

GC content: 41.86

Gene sequence:

>1443_bases
ATGCCTGATGTTAGCGGCAAACCTGATGCAAACCAGATTCCAGATGACGTCTGGCTTGACATTCTTATCAATTATCTTCA
ACCACAGGATGCTGTGAACCTGTCTGAAGTCAACAATCGCCTGAACCGACTTTTCGCAACTCAACATACTCAATCTGAGC
AATTGCACCGAAAAAAAACATTAGGAATTCTGAAGGTATTTACAGGATATAGTTCCACCTTCCTGTTTATACGCTTCAAT
GGCAAACAAAGATTATTTAAAACAAGAAACTGGAGTGCAGTGGATAGCGATAACATAACCCCACTATTAATGCCTATCTC
TCTGCCAGAGAACATCTCTTTTATTGAATCCATTCAATCAACATACAAACACACTGTTGTTGTTGGTCGTGATAATCGCG
ATCAAATTATAGTGGCAACAAATAAAATCCATAAGGATTATGCACAGCAAGAAACCAGCCACAATCAGCTGATTCCCCTT
CCATTACGCAATAATAACATTTCTCTGGTATCTGTCGGGAATAATGAAGAGAGTTATATTTTTAACCCTATTTTTCTCTT
ATCCCGCAATGCAGCAGGGCAATTGAGTCTTCAATTACATAAAATAAATAGCAAGGCTCCATTGGAAACCACAATTGAGG
AAAGAGACTGCCAGTTACCCATTCCATTGCCTGACACGCTTAAGACAGTAACAAAAATAAATTCAGGGATATGGCATACC
GTCATTGCGGGCTATGATCAATATAACCGACCTCAACTCGCCACCTTTGGAAAAAACTGCGATGGTCAATTAGGTACTGG
GGATTGCGAAAACCGAGATACGCCCACCCTGGCAAAGCTTCCCCCTGAAATGCATACGCTTCATATAATCCAAACCGGAT
TTTTTCACACCATTATCGCTGGGCTTGATAAAAATGGATGCCCTATCATTGCAAGCTGCGGTTATAACTCCGATGGCCAA
TTGGGATGCGGGGATAAAGATAATAAAAACACATTGATTCCCATCAAACTTCCAGAAAATATGAAATCAGTAGAAATGGT
CGCCACTGGAGTAAAGCACACCGTTATTGTGGGAAAAGACATAAATAACAAGCCTGTGGTTGCAACCTGTGGGCATAACG
GTTATGGGCAGCTGGGTACAGGCGATGAAGAGAACCGACTCTGCTTAACTCCCATCGAGATTCCCGAGGACATTACAACT
GTCGATTATGTTGGAGCAGGCACCTATCATACAGTCATTTGTGGACGGAACATGAAAAATCAGCCGATTCTTGCTTTATG
TGGGTGCAACTCAGACGGTGAATTGGGACTTGCTCCACAAAAAATCGCCAAAAAATCATCCCTGATGACCAACCCGGCCC
TGTTCTTTCCACCGAGACAAGACAGGAACGCAATAAACAATGTGATGAAAATTAGTAAATTCTCGCCATGTAATTTGCTA
TGA

Upstream 100 bases:

>100_bases
CAATAAGCCGCTGATTCTGCCCGATGCATAATTCTTTTCCATTCCAAAGATCGTGGGTTATAATGAAATCATCTGTCACC
AACCGTTTATAAAAATAAAC

Downstream 100 bases:

>100_bases
AATTTAATTTGTTTCCATAGAGAAAAACGAAGTTCCAGAATCTTGTTATTTTTCCGGAAGAAAAGAACCAATCCCGCTAC
CAAACTACTCTCTTACTTAT

Product: UVB-resistance protein UVR8

Products: NA

Alternate protein names: S-Layer Domain Protein

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MPDVSGKPDANQIPDDVWLDILINYLQPQDAVNLSEVNNRLNRLFATQHTQSEQLHRKKTLGILKVFTGYSSTFLFIRFN
GKQRLFKTRNWSAVDSDNITPLLMPISLPENISFIESIQSTYKHTVVVGRDNRDQIIVATNKIHKDYAQQETSHNQLIPL
PLRNNNISLVSVGNNEESYIFNPIFLLSRNAAGQLSLQLHKINSKAPLETTIEERDCQLPIPLPDTLKTVTKINSGIWHT
VIAGYDQYNRPQLATFGKNCDGQLGTGDCENRDTPTLAKLPPEMHTLHIIQTGFFHTIIAGLDKNGCPIIASCGYNSDGQ
LGCGDKDNKNTLIPIKLPENMKSVEMVATGVKHTVIVGKDINNKPVVATCGHNGYGQLGTGDEENRLCLTPIEIPEDITT
VDYVGAGTYHTVICGRNMKNQPILALCGCNSDGELGLAPQKIAKKSSLMTNPALFFPPRQDRNAINNVMKISKFSPCNLL

Sequences:

>Translated_480_residues
MPDVSGKPDANQIPDDVWLDILINYLQPQDAVNLSEVNNRLNRLFATQHTQSEQLHRKKTLGILKVFTGYSSTFLFIRFN
GKQRLFKTRNWSAVDSDNITPLLMPISLPENISFIESIQSTYKHTVVVGRDNRDQIIVATNKIHKDYAQQETSHNQLIPL
PLRNNNISLVSVGNNEESYIFNPIFLLSRNAAGQLSLQLHKINSKAPLETTIEERDCQLPIPLPDTLKTVTKINSGIWHT
VIAGYDQYNRPQLATFGKNCDGQLGTGDCENRDTPTLAKLPPEMHTLHIIQTGFFHTIIAGLDKNGCPIIASCGYNSDGQ
LGCGDKDNKNTLIPIKLPENMKSVEMVATGVKHTVIVGKDINNKPVVATCGHNGYGQLGTGDEENRLCLTPIEIPEDITT
VDYVGAGTYHTVICGRNMKNQPILALCGCNSDGELGLAPQKIAKKSSLMTNPALFFPPRQDRNAINNVMKISKFSPCNLL
>Mature_479_residues
PDVSGKPDANQIPDDVWLDILINYLQPQDAVNLSEVNNRLNRLFATQHTQSEQLHRKKTLGILKVFTGYSSTFLFIRFNG
KQRLFKTRNWSAVDSDNITPLLMPISLPENISFIESIQSTYKHTVVVGRDNRDQIIVATNKIHKDYAQQETSHNQLIPLP
LRNNNISLVSVGNNEESYIFNPIFLLSRNAAGQLSLQLHKINSKAPLETTIEERDCQLPIPLPDTLKTVTKINSGIWHTV
IAGYDQYNRPQLATFGKNCDGQLGTGDCENRDTPTLAKLPPEMHTLHIIQTGFFHTIIAGLDKNGCPIIASCGYNSDGQL
GCGDKDNKNTLIPIKLPENMKSVEMVATGVKHTVIVGKDINNKPVVATCGHNGYGQLGTGDEENRLCLTPIEIPEDITTV
DYVGAGTYHTVICGRNMKNQPILALCGCNSDGELGLAPQKIAKKSSLMTNPALFFPPRQDRNAINNVMKISKFSPCNLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53136; Mature: 53005

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50012 RCC1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVSGKPDANQIPDDVWLDILINYLQPQDAVNLSEVNNRLNRLFATQHTQSEQLHRKKT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGILKVFTGYSSTFLFIRFNGKQRLFKTRNWSAVDSDNITPLLMPISLPENISFIESIQS
HHHEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
TYKHTVVVGRDNRDQIIVATNKIHKDYAQQETSHNQLIPLPLRNNNISLVSVGNNEESYI
HHCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEE
FNPIFLLSRNAAGQLSLQLHKINSKAPLETTIEERDCQLPIPLPDTLKTVTKINSGIWHT
ECEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH
VIAGYDQYNRPQLATFGKNCDGQLGTGDCENRDTPTLAKLPPEMHTLHIIQTGFFHTIIA
HHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHHHHHH
GLDKNGCPIIASCGYNSDGQLGCGDKDNKNTLIPIKLPENMKSVEMVATGVKHTVIVGKD
HCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECC
INNKPVVATCGHNGYGQLGTGDEENRLCLTPIEIPEDITTVDYVGAGTYHTVICGRNMKN
CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
QPILALCGCNSDGELGLAPQKIAKKSSLMTNPALFFPPRQDRNAINNVMKISKFSPCNLL
CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PDVSGKPDANQIPDDVWLDILINYLQPQDAVNLSEVNNRLNRLFATQHTQSEQLHRKKT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGILKVFTGYSSTFLFIRFNGKQRLFKTRNWSAVDSDNITPLLMPISLPENISFIESIQS
HHHEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
TYKHTVVVGRDNRDQIIVATNKIHKDYAQQETSHNQLIPLPLRNNNISLVSVGNNEESYI
HHCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEE
FNPIFLLSRNAAGQLSLQLHKINSKAPLETTIEERDCQLPIPLPDTLKTVTKINSGIWHT
ECEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH
VIAGYDQYNRPQLATFGKNCDGQLGTGDCENRDTPTLAKLPPEMHTLHIIQTGFFHTIIA
HHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHHHHHH
GLDKNGCPIIASCGYNSDGQLGCGDKDNKNTLIPIKLPENMKSVEMVATGVKHTVIVGKD
HCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECC
INNKPVVATCGHNGYGQLGTGDEENRLCLTPIEIPEDITTVDYVGAGTYHTVICGRNMKN
CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
QPILALCGCNSDGELGLAPQKIAKKSSLMTNPALFFPPRQDRNAINNVMKISKFSPCNLL
CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA